STRINGSTRING
motB motB galE galE SGRA_1965 SGRA_1965 SGRA_1997 SGRA_1997 lysA lysA glyS1 glyS1 yrbG yrbG ahpC ahpC cdd cdd SGRA_2983 SGRA_2983 SGRA_3051 SGRA_3051 SGRA_3292 SGRA_3292 SGRA_3811 SGRA_3811 SGRA_3848 SGRA_3848 SGRA_4026 SGRA_4026 SGRA_4190 SGRA_4190 SGRA_4226 SGRA_4226 SGRA_0030 SGRA_0030 glnA glnA SGRA_0713 SGRA_0713 dnaJ dnaJ fadD fadD rfbB-2 rfbB-2 SGRA_1859 SGRA_1859
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
motBOmpA/MotB domain protein; COG1360 Flagellar motor protein. (347 aa)
galENAD dependent epimerase; COG0451 Nucleoside-diphosphate-sugar epimerases. (330 aa)
SGRA_1965Beta-lactamase domain protein; COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold; Belongs to the UPF0173 family. (232 aa)
SGRA_1997COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (636 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (413 aa)
glyS1glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. (519 aa)
yrbGNa+/ca+ antiporter, caca family protein; COG0530 Ca2+/Na+ antiporter. (331 aa)
ahpCCOG0450 Peroxiredoxin. (183 aa)
cddCytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (161 aa)
SGRA_2983COG1403 Restriction endonuclease. (217 aa)
SGRA_3051Fumarylacetoacetase; COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). (424 aa)
SGRA_3292Band 7 protein; COG2268 Uncharacterized protein conserved in bacteria. (710 aa)
SGRA_3811Peptidase S9B dipeptidylpeptidase IV domain protein; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases. (714 aa)
SGRA_3848Cation diffusion facilitator family transporter; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (334 aa)
SGRA_4026Hypothetical protein; COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold. (262 aa)
SGRA_4190COG1607 Acyl-CoA hydrolase. (163 aa)
SGRA_4226Metallophosphoesterase; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family. (319 aa)
SGRA_0030Peptidase S9B dipeptidylpeptidase IV domain protein; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases. (718 aa)
glnACOG3968 Uncharacterized protein related to glutamine synthetase. (722 aa)
SGRA_0713Thioesterase superfamily protein; COG1607 Acyl-CoA hydrolase. (172 aa)
dnaJChaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] (392 aa)
fadDCOG1022 Long-chain acyl-CoA synthetases (AMP-forming). (607 aa)
rfbB-2dTDP-glucose 4,6-dehydratase, NAD-dependent epimerase/dehydratase-related protein; COG0451 Nucleoside-diphosphate-sugar epimerases. (310 aa)
SGRA_1859Thioesterase superfamily protein; COG1607 Acyl-CoA hydrolase. (128 aa)
Your Current Organism:
Saprospira grandis
NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.