STRINGSTRING
SGRA_2845 SGRA_2845 SGRA_0008 SGRA_0008 trkA trkA SGRA_0062 SGRA_0062 SGRA_0343 SGRA_0343 SGRA_0354 SGRA_0354 SGRA_0441 SGRA_0441 SGRA_0444 SGRA_0444 SGRA_0510 SGRA_0510 pal pal SGRA_0723 SGRA_0723 SGRA_0771 SGRA_0771 SGRA_0858 SGRA_0858 SGRA_1001 SGRA_1001 SGRA_1051 SGRA_1051 SGRA_1057 SGRA_1057 SGRA_1073 SGRA_1073 SGRA_1104 SGRA_1104 SGRA_1153 SGRA_1153 SGRA_1176 SGRA_1176 SGRA_1269 SGRA_1269 SGRA_1355 SGRA_1355 SGRA_1384 SGRA_1384 pal-2 pal-2 SGRA_1489 SGRA_1489 SGRA_1550 SGRA_1550 SGRA_1576 SGRA_1576 SGRA_1689 SGRA_1689 SGRA_1710 SGRA_1710 SGRA_1760 SGRA_1760 SGRA_1784 SGRA_1784 lptB lptB atpC atpC atpD atpD SGRA_2001 SGRA_2001 SGRA_2046 SGRA_2046 SGRA_2063 SGRA_2063 tatA tatA sdhB sdhB SGRA_2273 SGRA_2273 atpB atpB atpE atpE atpF atpF atpH atpH atpA atpA atpG atpG SGRA_2351 SGRA_2351 SGRA_2372 SGRA_2372 lolC lolC SGRA_2433 SGRA_2433 lolC-2 lolC-2 SGRA_2528 SGRA_2528 mutS2 mutS2 folK folK SGRA_2628 SGRA_2628 SGRA_2655 SGRA_2655 SGRA_2658 SGRA_2658 SGRA_2721 SGRA_2721 SGRA_2729 SGRA_2729 SGRA_2814 SGRA_2814 SGRA_2865 SGRA_2865 tatC tatC SGRA_2889 SGRA_2889 SGRA_2892 SGRA_2892 SGRA_2983 SGRA_2983 SGRA_2996 SGRA_2996 SGRA_3090 SGRA_3090 SGRA_3091 SGRA_3091 SGRA_3195 SGRA_3195 SGRA_3196 SGRA_3196 SGRA_3285 SGRA_3285 SGRA_3292 SGRA_3292 argH argH SGRA_3335 SGRA_3335 SGRA_3401 SGRA_3401 SGRA_3451 SGRA_3451 SGRA_3452 SGRA_3452 SGRA_3554 SGRA_3554 SGRA_3618 SGRA_3618 SGRA_3671 SGRA_3671 SGRA_3672 SGRA_3672 SGRA_3696 SGRA_3696 SGRA_3733 SGRA_3733 SGRA_3753 SGRA_3753 SGRA_3780 SGRA_3780 SGRA_3839 SGRA_3839 SGRA_3851 SGRA_3851 SGRA_3867 SGRA_3867 SGRA_3930 SGRA_3930 SGRA_4056 SGRA_4056 SGRA_4121 SGRA_4121 SGRA_4165 SGRA_4165 SGRA_4167 SGRA_4167 SGRA_4175 SGRA_4175
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SGRA_2845Sodium/proton antiporter, cpa1 family protein; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (635 aa)
SGRA_0008COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (695 aa)
trkAPotassium transporter peripheral membrane component; COG0569 K+ transport systems, NAD-binding component. (447 aa)
SGRA_0062OmpA/MotB domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (351 aa)
SGRA_0343Hypothetical protein. (270 aa)
SGRA_0354Ion transporter; COG1226 Kef-type K+ transport systems, predicted NAD-binding component. (277 aa)
SGRA_0441Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component. (505 aa)
SGRA_0444COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (507 aa)
SGRA_0510Outer membrane protein 3a. (725 aa)
palOmpA/MotB domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (660 aa)
SGRA_0723Hypothetical protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component. (243 aa)
SGRA_0771Hypothetical protein. (617 aa)
SGRA_0858OmpA/MotB domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (382 aa)
SGRA_1001OmpA/MotB domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (866 aa)
SGRA_10514Fe-4S ferredoxin, iron-sulfur binding protein; COG1145 Ferredoxin. (118 aa)
SGRA_1057OmpA/MotB; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (564 aa)
SGRA_1073Hypothetical protein. (333 aa)
SGRA_1104Hypothetical protein. (318 aa)
SGRA_1153OmpA/MotB domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (359 aa)
SGRA_1176Hypothetical protein. (207 aa)
SGRA_1269COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (489 aa)
SGRA_1355Smr protein/MutS2; COG1193 Mismatch repair ATPase (MutS family). (365 aa)
SGRA_1384COG0488 ATPase components of ABC transporters with duplicated ATPase domains. (646 aa)
pal-2COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (677 aa)
SGRA_1489OmpA/MotB domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (352 aa)
SGRA_1550Polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. (487 aa)
SGRA_1576WbqC-like family protein. (229 aa)
SGRA_1689OmpA family outer membrane protein. (501 aa)
SGRA_1710OmpA/MotB domain protein; COG0457 FOG: TPR repeat. (851 aa)
SGRA_1760OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (833 aa)
SGRA_1784TM2 domain-containing protein; COG2314 Predicted membrane protein. (168 aa)
lptBABC transporter related protein; COG1137 ABC-type (unclassified) transport system, ATPase component. (246 aa)
atpCH+-transporting two-sector ATPase, epsilon subunit; COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit). (79 aa)
atpDATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (502 aa)
SGRA_2001Putative secreted protein containing cyclophilin type peptidyl-prolyl cis-trans isomerase domain; COG1413 FOG: HEAT repeat. (680 aa)
SGRA_2046OmpA/MotB domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (590 aa)
SGRA_2063Hypothetical protein. (287 aa)
tatATwin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (73 aa)
sdhBCOG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit. (257 aa)
SGRA_2273COG3440 Predicted restriction endonuclease. (292 aa)
atpBATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (421 aa)
atpEATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (64 aa)
atpFATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (173 aa)
atpHATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. (186 aa)
atpAF0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (534 aa)
atpGATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (301 aa)
SGRA_2351WbqC-like family protein. (210 aa)
SGRA_2372Permease YjgP/YjgQ family protein; COG0795 Predicted permeases. (493 aa)
lolCLipoprotein releasing system, transmembrane protein, LolC/E family; COG4591 ABC-type transport system, involved in lipoprotein release, permease component. (589 aa)
SGRA_2433OmpA/MotB domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (632 aa)
lolC-2Lipoprotein releasing system, transmembrane protein, LolC/E family; COG4591 ABC-type transport system, involved in lipoprotein release, permease component. (416 aa)
SGRA_2528OmpA/MotB domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (319 aa)
mutS2MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (800 aa)
folK2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase. (162 aa)
SGRA_2628COG1428 Deoxynucleoside kinases. (219 aa)
SGRA_2655Efflux transporter, RND family, MFP subunit; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (390 aa)
SGRA_2658Acriflavin resistance protein; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1149 aa)
SGRA_2721OmpA/MotB domain protein; COG0457 FOG: TPR repeat. (761 aa)
SGRA_2729Soluble ligand binding domain protein; COG1596 Periplasmic protein involved in polysaccharide export. (813 aa)
SGRA_2814Hypothetical protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components. (89 aa)
SGRA_2865Putative lipoprotein. (310 aa)
tatCSec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. (293 aa)
SGRA_2889COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (385 aa)
SGRA_2892Potassium channel protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component. (367 aa)
SGRA_2983COG1403 Restriction endonuclease. (217 aa)
SGRA_2996OmpA/MotB domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (380 aa)
SGRA_3090Hypothetical protein; COG4591 ABC-type transport system, involved in lipoprotein release, permease component. (381 aa)
SGRA_3091Hypothetical protein; COG4591 ABC-type transport system, involved in lipoprotein release, permease component. (424 aa)
SGRA_3195Fg-gap repeat protein. (743 aa)
SGRA_3196FG-GAP repeat protein. (731 aa)
SGRA_3285TM2 domain-containing protein; COG2314 Predicted membrane protein. (180 aa)
SGRA_3292Band 7 protein; COG2268 Uncharacterized protein conserved in bacteria. (710 aa)
argHCOG0165 Argininosuccinate lyase. (445 aa)
SGRA_3335Hypothetical protein. (197 aa)
SGRA_3401COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (372 aa)
SGRA_3451OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (760 aa)
SGRA_3452OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (760 aa)
SGRA_3554Ion transport protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component. (328 aa)
SGRA_3618Thrombospondin repeat-containing OmpA/MotB family outer membrane protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (418 aa)
SGRA_3671Acriflavin resistance protein; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1105 aa)
SGRA_3672RND family efflux transporter MFP subunit; COG0845 Membrane-fusion protein. (373 aa)
SGRA_3696OmpA/MotB domain protein; COG0457 FOG: TPR repeat. (643 aa)
SGRA_3733COG1428 Deoxynucleoside kinases. (210 aa)
SGRA_3753TM2 domain containing protein; COG2314 Predicted membrane protein. (123 aa)
SGRA_3780Hypothetical protein. (766 aa)
SGRA_3839Polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. (503 aa)
SGRA_3851OmpA/MotB domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (341 aa)
SGRA_3867COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (396 aa)
SGRA_3930OmpA family protein. (611 aa)
SGRA_4056ABC-2 type transporter; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component. (284 aa)
SGRA_4121OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (731 aa)
SGRA_4165TM2 domain containing protein; COG2314 Predicted membrane protein. (149 aa)
SGRA_4167TM2 domain containing protein; COG2314 Predicted membrane protein. (151 aa)
SGRA_4175Permease YjgP/YjgQ family protein; COG0795 Predicted permeases. (361 aa)
Your Current Organism:
Saprospira grandis
NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin
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