27 items (Saprospira grandis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SGRA_2984	AAA ATPase; COG3950 Predicted ATP-binding protein involved in virulence. (399 aa)
	clpB	ATP-dependent chaperone ClpB; COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family. (878 aa)
	SGRA_2572	SMC domain protein; COG4637 Predicted ATPase. (454 aa)
	SGRA_0814	ATPase-like protein; COG1106 Predicted ATPases. (1555 aa)
	SGRA_1715	ATP-binding protein; COG1106 Predicted ATPases. (434 aa)
	clpC	ATPase AAA-2 domain protein; COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family. (847 aa)
	SGRA_0414	COG0542 ATPases with chaperone activity, ATP-binding subunit. (753 aa)
	spoVK	Stage V sporulation protein K; COG0464 ATPases of the AAA+ class. (875 aa)
	lon	ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (804 aa)
	SGRA_1813	AAA ATPase central domain protein; COG0464 ATPases of the AAA+ class. (462 aa)
	SGRA_0244	Hypothetical protein; COG1106 Predicted ATPases. (399 aa)
	SGRA_0401	SMC domain protein; COG3950 Predicted ATP-binding protein involved in virulence. (532 aa)
	ftsH	ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (675 aa)
	ycaJ	Recombination factor protein RarA; COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase. (424 aa)
	SGRA_4131	ATPase; COG3950 Predicted ATP-binding protein involved in virulence. (751 aa)
	SGRA_4069	ATP/GTP-binding protein; COG3593 Predicted ATP-dependent endonuclease of the OLD family. (761 aa)
	SGRA_3937	COG0542 ATPases with chaperone activity, ATP-binding subunit. (1098 aa)
	SGRA_3908	COG0542 ATPases with chaperone activity, ATP-binding subunit. (1098 aa)
	SGRA_3894	SMC domain-containing protein; COG3950 Predicted ATP-binding protein involved in virulence. (441 aa)
	SGRA_3869	SMC domain-containing protein; COG3950 Predicted ATP-binding protein involved in virulence. (433 aa)
	SGRA_3539	Putative ATP binding protein; COG1129 ABC-type sugar transport system, ATPase component. (500 aa)
	SGRA_3404	ATPase-like protein; COG4637 Predicted ATPase. (354 aa)
	clpX	Sigma 54 interacting domain protein; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (419 aa)
	SGRA_3293	ATPase; COG0017 Aspartyl/asparaginyl-tRNA synthetases. (1654 aa)
	SGRA_3257	Hypothetical protein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components. (371 aa)
	SGRA_3086	COG0464 ATPases of the AAA+ class. (868 aa)
	SGRA_3037	SMC domain protein; COG1122 ABC-type cobalt transport system, ATPase component. (620 aa)

Your Current Organism:

Saprospira grandis

NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SGRA_0244	SGRA_2984	SGRA_0244	SGRA_2984	Hypothetical protein; COG1106 Predicted ATPases.	AAA ATPase; COG3950 Predicted ATP-binding protein involved in virulence.	0.406
SGRA_0244	SGRA_3869	SGRA_0244	SGRA_3869	Hypothetical protein; COG1106 Predicted ATPases.	SMC domain-containing protein; COG3950 Predicted ATP-binding protein involved in virulence.	0.426
SGRA_0244	SGRA_3894	SGRA_0244	SGRA_3894	Hypothetical protein; COG1106 Predicted ATPases.	SMC domain-containing protein; COG3950 Predicted ATP-binding protein involved in virulence.	0.449
SGRA_0244	SGRA_4131	SGRA_0244	SGRA_4131	Hypothetical protein; COG1106 Predicted ATPases.	ATPase; COG3950 Predicted ATP-binding protein involved in virulence.	0.472
SGRA_0401	SGRA_0814	SGRA_0401	SGRA_0814	SMC domain protein; COG3950 Predicted ATP-binding protein involved in virulence.	ATPase-like protein; COG1106 Predicted ATPases.	0.517
SGRA_0401	SGRA_2572	SGRA_0401	SGRA_2572	SMC domain protein; COG3950 Predicted ATP-binding protein involved in virulence.	SMC domain protein; COG4637 Predicted ATPase.	0.692
SGRA_0401	SGRA_3404	SGRA_0401	SGRA_3404	SMC domain protein; COG3950 Predicted ATP-binding protein involved in virulence.	ATPase-like protein; COG4637 Predicted ATPase.	0.530
SGRA_0414	lon	SGRA_0414	SGRA_0072	COG0542 ATPases with chaperone activity, ATP-binding subunit.	ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.	0.515
SGRA_0814	SGRA_0401	SGRA_0814	SGRA_0401	ATPase-like protein; COG1106 Predicted ATPases.	SMC domain protein; COG3950 Predicted ATP-binding protein involved in virulence.	0.517
SGRA_0814	SGRA_2572	SGRA_0814	SGRA_2572	ATPase-like protein; COG1106 Predicted ATPases.	SMC domain protein; COG4637 Predicted ATPase.	0.522
SGRA_0814	SGRA_2984	SGRA_0814	SGRA_2984	ATPase-like protein; COG1106 Predicted ATPases.	AAA ATPase; COG3950 Predicted ATP-binding protein involved in virulence.	0.620
SGRA_0814	SGRA_3037	SGRA_0814	SGRA_3037	ATPase-like protein; COG1106 Predicted ATPases.	SMC domain protein; COG1122 ABC-type cobalt transport system, ATPase component.	0.549
SGRA_0814	SGRA_3869	SGRA_0814	SGRA_3869	ATPase-like protein; COG1106 Predicted ATPases.	SMC domain-containing protein; COG3950 Predicted ATP-binding protein involved in virulence.	0.609
SGRA_0814	SGRA_3894	SGRA_0814	SGRA_3894	ATPase-like protein; COG1106 Predicted ATPases.	SMC domain-containing protein; COG3950 Predicted ATP-binding protein involved in virulence.	0.587
SGRA_0814	SGRA_4131	SGRA_0814	SGRA_4131	ATPase-like protein; COG1106 Predicted ATPases.	ATPase; COG3950 Predicted ATP-binding protein involved in virulence.	0.512
SGRA_1715	SGRA_3037	SGRA_1715	SGRA_3037	ATP-binding protein; COG1106 Predicted ATPases.	SMC domain protein; COG1122 ABC-type cobalt transport system, ATPase component.	0.400
SGRA_1715	SGRA_3869	SGRA_1715	SGRA_3869	ATP-binding protein; COG1106 Predicted ATPases.	SMC domain-containing protein; COG3950 Predicted ATP-binding protein involved in virulence.	0.400
SGRA_1715	SGRA_3894	SGRA_1715	SGRA_3894	ATP-binding protein; COG1106 Predicted ATPases.	SMC domain-containing protein; COG3950 Predicted ATP-binding protein involved in virulence.	0.443
SGRA_1715	SGRA_4131	SGRA_1715	SGRA_4131	ATP-binding protein; COG1106 Predicted ATPases.	ATPase; COG3950 Predicted ATP-binding protein involved in virulence.	0.510
SGRA_1813	ftsH	SGRA_1813	SGRA_1334	AAA ATPase central domain protein; COG0464 ATPases of the AAA+ class.	ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.	0.914