(5 nodes) 4Fe-4S ferredoxin-type, iron-sulphur binding domain network (Saprospira grandis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SGRA_1051	4Fe-4S ferredoxin, iron-sulfur binding protein; COG1145 Ferredoxin. (118 aa)
	SGRA_1349	Hypothetical protein; COG0247 Fe-S oxidoreductase. (455 aa)
	SGRA_1514	Putative iron-sulfur binding oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing. (1121 aa)
	queG	Iron-sulfur cluster binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. (309 aa)
	sdhB	COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit. (257 aa)

Your Current Organism:

Saprospira grandis

NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SGRA_1051	SGRA_1514	SGRA_1051	SGRA_1514	4Fe-4S ferredoxin, iron-sulfur binding protein; COG1145 Ferredoxin.	Putative iron-sulfur binding oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	0.614
SGRA_1051	sdhB	SGRA_1051	SGRA_2256	4Fe-4S ferredoxin, iron-sulfur binding protein; COG1145 Ferredoxin.	COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit.	0.946
SGRA_1349	SGRA_1514	SGRA_1349	SGRA_1514	Hypothetical protein; COG0247 Fe-S oxidoreductase.	Putative iron-sulfur binding oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	0.601
SGRA_1514	SGRA_1051	SGRA_1514	SGRA_1051	Putative iron-sulfur binding oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	4Fe-4S ferredoxin, iron-sulfur binding protein; COG1145 Ferredoxin.	0.614
SGRA_1514	SGRA_1349	SGRA_1514	SGRA_1349	Putative iron-sulfur binding oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	Hypothetical protein; COG0247 Fe-S oxidoreductase.	0.601
SGRA_1514	sdhB	SGRA_1514	SGRA_2256	Putative iron-sulfur binding oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit.	0.483
sdhB	SGRA_1051	SGRA_2256	SGRA_1051	COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit.	4Fe-4S ferredoxin, iron-sulfur binding protein; COG1145 Ferredoxin.	0.946
sdhB	SGRA_1514	SGRA_2256	SGRA_1514	COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit.	Putative iron-sulfur binding oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	0.483