21 items (Suhomyces tanzawaensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Predicted Interactions

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Your Input:
	A0A1E4SBW4	45 kDa subunit of RNA polymerase II. (311 aa)
	A0A1E4SCB2	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (957 aa)
	A0A1E4SDL0	S1 motif domain-containing protein. (173 aa)
	A0A1E4SDM2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1233 aa)
	A0A1E4SEN5	DNA-directed RNA polymerases I. (73 aa)
	A0A1E4SFB1	FACT complex subunit SPT16. (1026 aa)
	A0A1E4SFG6	DNA-directed RNA polymerases I, II, and III subunit RPABC1. (214 aa)
	A0A1E4SFU9	DNA-directed RNA polymerase II subunit L. (72 aa)
	A0A1E4SH19	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (112 aa)
	A0A1E4SHT3	Plus-3-domain-containing protein. (554 aa)
	A0A1E4SI32	Putative RNA polymerase. (157 aa)
	A0A1E4SIX2	RNA polymerase II core subunit. (121 aa)
	A0A1E4SJC8	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1601 aa)
	A0A1E4SJR5	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (535 aa)
	A0A1E4SJZ1	RNA polymerase II fourth largest subunit. (191 aa)
	A0A1E4SKY6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (112 aa)
	A0A1E4SMU8	CDC73-domain-containing protein. (366 aa)
	A0A1E4SNR8	DNA-directed RNA polymerase II regulator. (440 aa)
	A0A1E4SP64	Leo1-like protein. (372 aa)
	A0A1E4SQN7	RTR1-type domain-containing protein. (262 aa)
	A0A1E4SS05	TPR-like protein. (1108 aa)

Your Current Organism:

Suhomyces tanzawaensis

NCBI taxonomy Id: 984487
Other names: Candida tanzawaensis NRRL Y-17324, S. tanzawaensis NRRL Y-17324, Suhomyces tanzawaensis NRRL Y-17324

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1E4SBW4	A0A1E4SCB2	45 kDa subunit of RNA polymerase II.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.992
A0A1E4SBW4	A0A1E4SDL0	45 kDa subunit of RNA polymerase II.	S1 motif domain-containing protein.	0.999
A0A1E4SBW4	A0A1E4SDM2	45 kDa subunit of RNA polymerase II.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A0A1E4SBW4	A0A1E4SEN5	45 kDa subunit of RNA polymerase II.	DNA-directed RNA polymerases I.	0.999
A0A1E4SBW4	A0A1E4SFB1	45 kDa subunit of RNA polymerase II.	FACT complex subunit SPT16.	0.976
A0A1E4SBW4	A0A1E4SFG6	45 kDa subunit of RNA polymerase II.	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	0.999
A0A1E4SBW4	A0A1E4SFU9	45 kDa subunit of RNA polymerase II.	DNA-directed RNA polymerase II subunit L.	0.999
A0A1E4SBW4	A0A1E4SH19	45 kDa subunit of RNA polymerase II.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.993
A0A1E4SBW4	A0A1E4SHT3	45 kDa subunit of RNA polymerase II.	Plus-3-domain-containing protein.	0.914
A0A1E4SBW4	A0A1E4SI32	45 kDa subunit of RNA polymerase II.	Putative RNA polymerase.	0.999
A0A1E4SBW4	A0A1E4SIX2	45 kDa subunit of RNA polymerase II.	RNA polymerase II core subunit.	0.999
A0A1E4SBW4	A0A1E4SJC8	45 kDa subunit of RNA polymerase II.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A0A1E4SBW4	A0A1E4SJR5	45 kDa subunit of RNA polymerase II.	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]	0.960
A0A1E4SBW4	A0A1E4SJZ1	45 kDa subunit of RNA polymerase II.	RNA polymerase II fourth largest subunit.	0.999
A0A1E4SBW4	A0A1E4SKY6	45 kDa subunit of RNA polymerase II.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
A0A1E4SBW4	A0A1E4SMU8	45 kDa subunit of RNA polymerase II.	CDC73-domain-containing protein.	0.920
A0A1E4SBW4	A0A1E4SNR8	45 kDa subunit of RNA polymerase II.	DNA-directed RNA polymerase II regulator.	0.954
A0A1E4SBW4	A0A1E4SP64	45 kDa subunit of RNA polymerase II.	Leo1-like protein.	0.918
A0A1E4SBW4	A0A1E4SQN7	45 kDa subunit of RNA polymerase II.	RTR1-type domain-containing protein.	0.976
A0A1E4SBW4	A0A1E4SS05	45 kDa subunit of RNA polymerase II.	TPR-like protein.	0.953