29 items (Suhomyces tanzawaensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1E4SBP4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1633 aa)
	A0A1E4SBR7	RNA polymerase I, subunit RPA34.5. (164 aa)
	A0A1E4SC93	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (497 aa)
	A0A1E4SCA0	Uncharacterized protein. (136 aa)
	A0A1E4SCY5	Cyclin-like protein; Belongs to the cyclin family. (387 aa)
	A0A1E4SEN5	DNA-directed RNA polymerases I. (73 aa)
	A0A1E4SF92	RNA polymerase III (C) subunit. (334 aa)
	A0A1E4SFG6	DNA-directed RNA polymerases I, II, and III subunit RPABC1. (214 aa)
	A0A1E4SFU9	DNA-directed RNA polymerase II subunit L. (72 aa)
	A0A1E4SFX6	RRN7-type domain-containing protein. (494 aa)
	A0A1E4SH06	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily. (324 aa)
	A0A1E4SHM1	BSD domain-containing protein. (662 aa)
	A0A1E4SHS3	Histone H2B; Belongs to the histone H2B family. (132 aa)
	A0A1E4SHU4	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1167 aa)
	A0A1E4SI32	Putative RNA polymerase. (157 aa)
	A0A1E4SJK3	RNA polymerase I-specific transcription initiation factor RRN3. (674 aa)
	A0A1E4SKM3	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (148 aa)
	A0A1E4SKQ1	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (514 aa)
	A0A1E4SKX0	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
	A0A1E4SLL9	RNA polymerase II transcription factor B subunit 5. (71 aa)
	A0A1E4SLQ4	RNA polymerase I associated factor, A49-like protein. (413 aa)
	A0A1E4SMV8	Histone H2B; Belongs to the histone H2B family. (132 aa)
	A0A1E4SAQ1	Hyphal_reg_CWP domain-containing protein. (329 aa)
	A0A1E4SP78	DNA repair helicase RAD3. (788 aa)
	A0A1E4SPA0	TATA-box binding protein. (247 aa)
	A0A1E4SQE0	RNA polymerase II transcription factor B subunit 3. (340 aa)
	A0A1E4SQQ6	Tfb4-domain-containing protein. (407 aa)
	A0A1E4SRL0	DNA helicase. (842 aa)
	A0A1E4SRR1	Uncharacterized protein. (299 aa)

Your Current Organism:

Suhomyces tanzawaensis

NCBI taxonomy Id: 984487
Other names: Candida tanzawaensis NRRL Y-17324, S. tanzawaensis NRRL Y-17324, Suhomyces tanzawaensis NRRL Y-17324

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1E4SAQ1	A0A1E4SBP4	Hyphal_reg_CWP domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.805
A0A1E4SAQ1	A0A1E4SBR7	Hyphal_reg_CWP domain-containing protein.	RNA polymerase I, subunit RPA34.5.	0.554
A0A1E4SAQ1	A0A1E4SC93	Hyphal_reg_CWP domain-containing protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.898
A0A1E4SAQ1	A0A1E4SCA0	Hyphal_reg_CWP domain-containing protein.	Uncharacterized protein.	0.860
A0A1E4SAQ1	A0A1E4SCY5	Hyphal_reg_CWP domain-containing protein.	Cyclin-like protein; Belongs to the cyclin family.	0.823
A0A1E4SAQ1	A0A1E4SEN5	Hyphal_reg_CWP domain-containing protein.	DNA-directed RNA polymerases I.	0.914
A0A1E4SAQ1	A0A1E4SF92	Hyphal_reg_CWP domain-containing protein.	RNA polymerase III (C) subunit.	0.865
A0A1E4SAQ1	A0A1E4SFG6	Hyphal_reg_CWP domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	0.947
A0A1E4SAQ1	A0A1E4SFU9	Hyphal_reg_CWP domain-containing protein.	DNA-directed RNA polymerase II subunit L.	0.921
A0A1E4SAQ1	A0A1E4SFX6	Hyphal_reg_CWP domain-containing protein.	RRN7-type domain-containing protein.	0.824
A0A1E4SAQ1	A0A1E4SH06	Hyphal_reg_CWP domain-containing protein.	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	0.814
A0A1E4SAQ1	A0A1E4SHM1	Hyphal_reg_CWP domain-containing protein.	BSD domain-containing protein.	0.907
A0A1E4SAQ1	A0A1E4SHS3	Hyphal_reg_CWP domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.675
A0A1E4SAQ1	A0A1E4SHU4	Hyphal_reg_CWP domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.828
A0A1E4SAQ1	A0A1E4SI32	Hyphal_reg_CWP domain-containing protein.	Putative RNA polymerase.	0.919
A0A1E4SAQ1	A0A1E4SJK3	Hyphal_reg_CWP domain-containing protein.	RNA polymerase I-specific transcription initiation factor RRN3.	0.728
A0A1E4SAQ1	A0A1E4SKM3	Hyphal_reg_CWP domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.916
A0A1E4SAQ1	A0A1E4SKQ1	Hyphal_reg_CWP domain-containing protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.928
A0A1E4SAQ1	A0A1E4SKX0	Hyphal_reg_CWP domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.820
A0A1E4SAQ1	A0A1E4SLL9	Hyphal_reg_CWP domain-containing protein.	RNA polymerase II transcription factor B subunit 5.	0.786