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| | rpl24 | 50S ribosomal protein L24; Located at the polypeptide exit tunnel on the outside of the subunit. (159 aa) |
| | rps4e | 30S ribosomal protein S4E, central domain-containing protein; Belongs to the eukaryotic ribosomal protein eS4 family. (248 aa) |
| | VMUT_0108 | Deoxyribonuclease. (71 aa) |
| | VMUT_0136 | asparaginyl-tRNA synthetase. (429 aa) |
| | VMUT_0175 | Translation initiation factor aIF-2B subunit, conjectural; Belongs to the eIF-2B alpha/beta/delta subunits family. (291 aa) |
| | tyrS | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 4 subfamily. (374 aa) |
| | prf1 | Peptide chain release factor 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. (385 aa) |
| | VMUT_0237 | 30S ribosomal protein S26E. (139 aa) |
| | rps13 | 30S ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. (158 aa) |
| | rps17e | 30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family. (76 aa) |
| | metG | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily. (584 aa) |
| | rpl14 | 50S ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (144 aa) |
| | VMUT_0344 | glycyl-tRNA synthetase. (591 aa) |
| | rps6e | 30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. (145 aa) |
| | VMUT_0372 | phenylalanyl-tRNA synthetase subunit beta. (552 aa) |
| | pheS | phenylalanyl-tRNA synthetase subunit alpha; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily. (524 aa) |
| | rps15 | 30S ribosomal protein S15P. (150 aa) |
| | VMUT_0396 | seryl-tRNA synthetase. (468 aa) |
| | lysS | lysyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (568 aa) |
| | VMUT_0449 | 50S ribosomal protein L15e. (192 aa) |
| | rpl39e | 50S ribosomal protein L39e; Belongs to the eukaryotic ribosomal protein eL39 family. (54 aa) |
| | rps19e | 30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. (160 aa) |
| | rpl44e | 50S ribosomal protein L44E; Binds to the 23S rRNA. (94 aa) |
| | rps27e | 30S ribosomal protein S27E. (71 aa) |
| | VMUT_0470 | Translation initiation factor 2, alpha subunit. (283 aa) |
| | VMUT_0549 | Translation initiation factor IF2/IF5. (141 aa) |
| | rpl12 | Ribosomal protein 60S; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family. (113 aa) |
| | pth | Aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. (121 aa) |
| | rpl19e | 50S ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. (148 aa) |
| | rpl18 | 50S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (213 aa) |
| | aspS | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). (433 aa) |
| | eif1a | S1 IF1 family protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (105 aa) |
| | gatE | Putative aspartyl-tRNA(Asn) amidotransferase, B subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate. (625 aa) |
| | rps7 | 30S ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family. (222 aa) |
| | infB | Translation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. (598 aa) |
| | rpl24e | 50S ribosomal protein L24E; Binds to the 23S rRNA. (64 aa) |
| | rps27ae | Ribosomal protein S27a; Belongs to the eukaryotic ribosomal protein eS31 family. (64 aa) |
| | rpl40e | 50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. (51 aa) |
| | rps8e | 30S ribosomal protein S8e. (133 aa) |
| | rps8 | 30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (130 aa) |
| | rps28e | 30S ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family. (81 aa) |
| | rpl7ae | 50S ribosomal protein L7Ae/L30e/S12e/Gadd45; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. (173 aa) |
| | rps19p | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (199 aa) |
| | VMUT_0763 | Thioesterase superfamily protein. (160 aa) |
| | rpl37e | 50S ribosomal protein L37e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family. (62 aa) |
| | gltX | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). (588 aa) |
| | gatD | glutamyl-tRNA(Gln) amidotransferase, subunit D; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate. (449 aa) |
| | rpl14e | 50S ribosomal protein L14; Belongs to the eukaryotic ribosomal protein eL14 family. (100 aa) |
| | rps11 | 30S ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. (165 aa) |
| | rpl31e | Ribosomal protein L31e; Belongs to the ribosomal protein L31e family. (108 aa) |
| | rpl10e | 50S ribosomal protein L10e/L16; Belongs to the universal ribosomal protein uL16 family. (180 aa) |
| | alaS | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (912 aa) |
| | rpl10 | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (353 aa) |
| | rpl1 | 50S ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release. (219 aa) |
| | rpl11 | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. (172 aa) |
| | spt5 | NusG antitermination factor; Stimulates transcription elongation; Belongs to the archaeal Spt5 family. (148 aa) |
| | rpl18a | Ribosomal protein LX. (85 aa) |
| | VMUT_0935 | aminoacyl-tRNA synthetase class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family. (892 aa) |
| | ef1b | Translation elongation factor aEF-1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. (92 aa) |
| | rps9 | 30S ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. (158 aa) |
| | rpl13 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (195 aa) |
| | rpl18e | 50S ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL18 family. (122 aa) |
| | rps24e | 30S ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa) |
| | VMUT_1164 | Selenocysteine-specific translation elongation factor-like protein. (282 aa) |
| | VMUT_1189 | Hypothetical protein. (46 aa) |
| | rpl22 | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (184 aa) |
| | eif5a | Translation initiation factor eIF-5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. (132 aa) |
| | rpl21e | 50S ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family. (107 aa) |
| | hisS | histidyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. (430 aa) |
| | cysS | cysteinyl-tRNA synthetase. (503 aa) |
| | VMUT_1267 | Hypothetical protein. (188 aa) |
| | rpl29 | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (61 aa) |
| | rps3 | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. (228 aa) |
| | VMUT_1336 | Threonyl/alanyl tRNA synthetase SAD. (240 aa) |
| | rpl5 | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (197 aa) |
| | VMUT_1353 | Thioesterase superfamily protein. (169 aa) |
| | VMUT_1467 | Translation initiation factor SUI1. (125 aa) |
| | rps10 | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa) |
| | tuf | Translation elongation factor EF-1, subunit alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (444 aa) |
| | leuS | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (998 aa) |
| | VMUT_1568 | Protein synthesis factor GTP-binding protein. (414 aa) |
| | rpl34e | 50S ribosomal protein L34e; Belongs to the eukaryotic ribosomal protein eL34 family. (88 aa) |
| | rps2 | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (225 aa) |
| | VMUT_1642 | ABC transporter related protein. (610 aa) |
| | rps4 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (179 aa) |
| | VMUT_1728 | Hypothetical protein. (668 aa) |
| | rpl35ae | 50S ribosomal protein L35Ae; Belongs to the eukaryotic ribosomal protein eL33 family. (94 aa) |
| | VMUT_1737 | TGS domain protein. (392 aa) |
| | rpl13e | 50S ribosomal protein L13E; Belongs to the eukaryotic ribosomal protein eL13 family. (158 aa) |
| | rps5 | 30S ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy. (203 aa) |
| | rpl30 | 50S ribosomal protein L30P. (184 aa) |
| | rpl15 | 50S ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (157 aa) |
| | rpl3 | 50S ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (342 aa) |
| | rpl4 | 50S ribosomal protein L4P; Forms part of the polypeptide exit tunnel. (278 aa) |
| | rpl23 | 50S ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. (81 aa) |
| | thrS | threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. (621 aa) |
| | rpl37ae | 50S ribosomal protein L37Ae; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL43 family. Putative zinc-binding subfamily. (92 aa) |
| | VMUT_1831 | tRNA synthetase class II (D K and N). (357 aa) |
| | proS | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). (510 aa) |
| | VMUT_1851 | PUA domain containing protein. (178 aa) |
| | VMUT_1852 | tRNA-binding domain protein. (112 aa) |
| | rps14 | 30S ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles. (54 aa) |
| | argS | arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (643 aa) |
| | rpl30e | 50S ribosomal protein L7Ae/L30e/S12e/Gadd45; Belongs to the eukaryotic ribosomal protein eL30 family. (103 aa) |
| | rps12 | 30S ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. (150 aa) |
| | eif6 | Putative translation initiation factor eIF-6; Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex. (226 aa) |
| | VMUT_2110 | B3/4 domain protein. (232 aa) |
| | VMUT_2113 | isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1004 aa) |
| | rpl6 | 50S ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (190 aa) |
| | rps17 | 30S ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (150 aa) |
| | fusA | Translation elongation factor aEF-2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF [...] (739 aa) |
| | rpl2 | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (271 aa) |
| | VMUT_2243 | 50S ribosomal protein L38. (67 aa) |
| | VMUT_2324 | tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (356 aa) |
