STRINGSTRING
AET59359.1 AET59359.1 AET59572.1 AET59572.1 AET59573.1 AET59573.1 odhA odhA AET59991.1 AET59991.1 AET59992.1 AET59992.1 AET60038.1 AET60038.1 AET60039.1 AET60039.1 AET61332.1 AET61332.1 AET60041.1 AET60041.1 sucC sucC sucD sucD AET62035.1 AET62035.1 AET62034.1 AET62034.1 AET62032.1 AET62032.1 aspA-3 aspA-3 aspA-2 aspA-2 sdhB sdhB AET57041.1 AET57041.1 AET57232.1 AET57232.1 AET57339.1 AET57339.1 AET57365.1 AET57365.1 AET57366.1 AET57366.1 AET57367.1 AET57367.1 AET57385.1 AET57385.1 AET57386.1 AET57386.1 ppc ppc AET57603.1 AET57603.1 AET57767.1 AET57767.1 mqo mqo aspA aspA fumC fumC glgA glgA glgB glgB glgC-2 glgC-2 AET60616.1 AET60616.1 AET60573.1 AET60573.1 glgC glgC AET59345.1 AET59345.1 AET59065.1 AET59065.1 AET58655.1 AET58655.1 AET59358.1 AET59358.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AET59359.1Putative ylbE protein. (419 aa)
AET59572.13-ketoacid-coenzyme a transferase1; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit. (218 aa)
AET59573.1COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit. (221 aa)
odhA2-oxoglutarate dehydrogenase E1 component (alpha-ketoglutarate dehydrogenase); E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2). (963 aa)
AET59991.12-methylcitrate synthase/citrate synthase ii; COG0372 Citrate synthase; Belongs to the citrate synthase family. (370 aa)
AET59992.1Isocitrate dehydrogenase [NADP] (Oxalosuccinate decarboxylase); COG0538 Isocitrate dehydrogenases. (431 aa)
AET60038.1COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1228 aa)
AET60039.1COG1140 Nitrate reductase beta subunit. (504 aa)
AET61332.1Periplasmic [Fe] hydrogenase large subunit (Fe hydrogenlyase); COG4624 Iron only hydrogenase large subunit, C-terminal domain. (446 aa)
AET60041.1COG2181 Nitrate reductase gamma subunit. (232 aa)
sucCsuccinyl-CoA synthetase subunit beta (SCS-beta); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (386 aa)
sucDsuccinyl-CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (309 aa)
AET62035.1COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1224 aa)
AET62034.1COG1140 Nitrate reductase beta subunit. (525 aa)
AET62032.1COG2181 Nitrate reductase gamma subunit. (226 aa)
aspA-3COG1027 Aspartate ammonia-lyase. (469 aa)
aspA-2COG1027 Aspartate ammonia-lyase. (482 aa)
sdhBCOG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit. (255 aa)
AET57041.1COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit. (224 aa)
AET57232.1COG1271 Cytochrome bd-type quinol oxidase, subunit 1. (275 aa)
AET57339.1COG1271 Cytochrome bd-type quinol oxidase, subunit 1. (448 aa)
AET57365.1COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4. (111 aa)
AET57366.1Quinol oxidase polypeptide III (quinol oxidase aa3-600, subunit qoxC); COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. (202 aa)
AET57367.1COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1. (658 aa)
AET57385.1COG1294 Cytochrome bd-type quinol oxidase, subunit 2. (337 aa)
AET57386.1COG1271 Cytochrome bd-type quinol oxidase, subunit 1. (468 aa)
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (930 aa)
AET57603.1Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating). (370 aa)
AET57767.1COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (710 aa)
mqoMalate:quinone oxidoreductase; COG0579 Predicted dehydrogenase. (499 aa)
aspACOG1027 Aspartate ammonia-lyase. (472 aa)
fumCFumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (462 aa)
glgAGlycogen synthase synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (480 aa)
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (640 aa)
glgC-2Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (408 aa)
AET60616.1Hypothetical protein; COG3278 Cbb3-type cytochrome oxidase, subunit 1. (120 aa)
AET60573.1Glycogen biosynthesis protein GlgD; COG0448 ADP-glucose pyrophosphorylase. (367 aa)
glgCGlucose-1-phosphate adenylyltransferase (ADP-glucose synthase); Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (381 aa)
AET59345.1Sarcosine oxidase subunit alpha; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. (111 aa)
AET59065.1Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (903 aa)
AET58655.1COG2322 Predicted membrane protein. (187 aa)
AET59358.1Hypothetical protein; COG0074 Succinyl-CoA synthetase, alpha subunit. (586 aa)
Your Current Organism:
Paenibacillus terrae
NCBI taxonomy Id: 985665
Other names: P. terrae HPL-003, Paenibacillus sp. HPL-003, Paenibacillus terrae HPL-003, Paenibacillus terrae str. HPL-003, Paenibacillus terrae strain HPL-003
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