STRINGSTRING
queA queA AET56814.1 AET56814.1 hemL hemL tig tig AET56916.1 AET56916.1 nagB nagB AET56986.1 AET56986.1 AET56987.1 AET56987.1 AET57107.1 AET57107.1 AET57165.1 AET57165.1 murI murI AET57171.1 AET57171.1 xylA xylA deoB deoB glmM glmM truA truA AET57597.1 AET57597.1 AET57667.1 AET57667.1 AET57670.1 AET57670.1 AET57705.1 AET57705.1 AET57727.1 AET57727.1 fni fni AET57810.1 AET57810.1 kduI kduI AET57920.1 AET57920.1 gpmA gpmA AET57942.1 AET57942.1 AET58012.1 AET58012.1 rhaA rhaA araA araA araD araD gyrB gyrB gyrA gyrA AET58301.1 AET58301.1 AET58323.1 AET58323.1 AET58350.1 AET58350.1 hisA hisA tpiA tpiA gpmI gpmI AET58534.1 AET58534.1 AET58598.1 AET58598.1 nanE nanE nnrE nnrE uxaC uxaC AET58856.1 AET58856.1 AET58886.1 AET58886.1 AET58923.1 AET58923.1 AET58924.1 AET58924.1 hemL-2 hemL-2 AET59102.1 AET59102.1 purE purE AET59167.1 AET59167.1 AET59319.1 AET59319.1 AET59320.1 AET59320.1 iolB iolB AET59341.1 AET59341.1 AET59413.1 AET59413.1 groL groL AET59643.1 AET59643.1 pgi pgi AET59770.1 AET59770.1 AET59828.1 AET59828.1 AET59873.1 AET59873.1 AET59911.1 AET59911.1 AET59913.1 AET59913.1 mtnA mtnA AET60018.1 AET60018.1 AET60057.1 AET60057.1 murI-2 murI-2 AET60165.1 AET60165.1 AET60181.1 AET60181.1 rpiA rpiA topA topA truB truB murI-3 murI-3 uxaC-2 uxaC-2 AET60681.1 AET60681.1 AET60712.1 AET60712.1 AET60713.1 AET60713.1 AET60783.1 AET60783.1 AET60800.1 AET60800.1 rbsD rbsD AET60888.1 AET60888.1 AET60957.1 AET60957.1 AET61009.1 AET61009.1 AET61021.1 AET61021.1 AET61098.1 AET61098.1 AET61156.1 AET61156.1 AET61250.1 AET61250.1 AET61300.1 AET61300.1 AET61304.1 AET61304.1 AET61305.1 AET61305.1 mtnW mtnW trpF trpF AET61395.1 AET61395.1 AET61435.1 AET61435.1 AET61458.1 AET61458.1 AET61570.1 AET61570.1 AET61572.1 AET61572.1 AET61601.1 AET61601.1 dapF dapF AET61732.1 AET61732.1 AET61860.1 AET61860.1 AET62233.1 AET62233.1
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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gene fusions
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queAS-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine biosynthesis protein queA); Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (342 aa)
AET56814.1RNA pseudouridine synthase (RNA-uridine isomerase); Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (303 aa)
hemLCOG0001 Glutamate-1-semialdehyde aminotransferase. (427 aa)
tigTrigger factor (TF); Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. (437 aa)
AET56916.1Hypothetical protein; COG1086 Predicted nucleoside-diphosphate sugar epimerases. (326 aa)
nagBGlucosamine-6-phosphate deaminase (glucosamine-6-phosphate isomerase); Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. (242 aa)
AET56986.1Hypothetical protein; COG1086 Predicted nucleoside-diphosphate sugar epimerases. (328 aa)
AET56987.1COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (363 aa)
AET57107.1COG2017 Galactose mutarotase and related enzymes. (321 aa)
AET57165.1Tautomerase yrdn; COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog. (130 aa)
murIGlutamate racemase 2; Provides the (R)-glutamate required for cell wall biosynthesis. (261 aa)
AET57171.1Hypothetical protein. (357 aa)
xylACOG2115 Xylose isomerase; Belongs to the xylose isomerase family. (438 aa)
deoBPhosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (393 aa)
glmMPhosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (446 aa)
truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (256 aa)
AET57597.1Glucose-1-phosphate thymidylyltransferase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (182 aa)
AET57667.1COG0381 UDP-N-acetylglucosamine 2-epimerase. (379 aa)
AET57670.1Hypothetical protein; COG1086 Predicted nucleoside-diphosphate sugar epimerases. (339 aa)
AET57705.1COG1109 Phosphomannomutase. (572 aa)
AET57727.1COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (389 aa)
fniIsopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (366 aa)
AET57810.1cobalt-precorrin-8X methylmutase (cobalt-precorrin isomerase) (HBA synthase); COG2082 Precorrin isomerase. (214 aa)
kduI5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (276 aa)
AET57920.1N-acyl-D-glucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man). (391 aa)
gpmAPhosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (249 aa)
AET57942.16-phospho 3-hexuloisomerase (PHI); COG0794 Predicted sugar phosphate isomerase involved in capsule formation. (185 aa)
AET58012.1Xylose isomerase domain-containing protein; COG1082 Sugar phosphate isomerases/epimerases. (265 aa)
rhaACOG4806 L-rhamnose isomerase; Belongs to the rhamnose isomerase family. (418 aa)
araAL-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (474 aa)
araDCOG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases. (231 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (636 aa)
gyrADNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (858 aa)
AET58301.1COG0760 Parvulin-like peptidyl-prolyl isomerase. (370 aa)
AET58323.1COG0760 Parvulin-like peptidyl-prolyl isomerase. (314 aa)
AET58350.1COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family. (233 aa)
hisA1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase. (243 aa)
tpiATriosephosphate isomerase (Triose-phosphate isomerase); Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (250 aa)
gpmIPhosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (514 aa)
AET58534.1Beta-phosphoglucomutase (beta-PGM); COG0637 Predicted phosphatase/phosphohexomutase. (225 aa)
AET58598.1Hypothetical protein; COG0796 Glutamate racemase. (225 aa)
nanEN-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P). (239 aa)
nnrESugar kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of [...] (551 aa)
uxaCCOG1904 Glucuronate isomerase. (468 aa)
AET58856.1Nudix hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. (210 aa)
AET58886.1Tautomerase yrdn. (129 aa)
AET58923.1COG0036 Pentose-5-phosphate-3-epimerase. (218 aa)
AET58924.1COG0698 Ribose 5-phosphate isomerase RpiB. (149 aa)
hemL-2COG0001 Glutamate-1-semialdehyde aminotransferase. (438 aa)
AET59102.1DNA topoisomerase III; COG0550 Topoisomerase IA. (710 aa)
purEPhosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (161 aa)
AET59167.1AIPR protein. (613 aa)
AET59319.1Myo-inositol catabolism protein IolI; COG1082 Sugar phosphate isomerases/epimerases. (281 aa)
AET59320.1YolI. (129 aa)
iolBIolB; Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D-gluconate). (272 aa)
AET59341.1COG3938 Proline racemase; Belongs to the proline racemase family. (333 aa)
AET59413.1Peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (225 aa)
groLMolecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (542 aa)
AET59643.1Alanine racemase 1; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (398 aa)
pgiPhosphoglucose isomerase (pgi); COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family. (451 aa)
AET59770.1Pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (348 aa)
AET59828.1Mannose-6-phosphate isomerase, class i; COG1482 Phosphomannose isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family. (324 aa)
AET59873.1RNA pseudouridine synthase (RNA-uridine isomerase); Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (319 aa)
AET59911.1Hypothetical protein. (223 aa)
AET59913.1COG4126 Hydantoin racemase. (211 aa)
mtnAMethylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). (368 aa)
AET60018.1L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose. (104 aa)
AET60057.1COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog. (128 aa)
murI-2Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (278 aa)
AET60165.1RNA pseudouridine synthase (RNA-uridine isomerase); COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family. (260 aa)
AET60181.1COG1657 Squalene cyclase. (631 aa)
rpiARibose-5-phosphate isomerase a; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (222 aa)
topADNA topoisomerase i; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (700 aa)
truBtRNA pseudouridine synthase b; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (311 aa)
murI-3Glutamate racemase 2; Provides the (R)-glutamate required for cell wall biosynthesis. (267 aa)
uxaC-2COG1904 Glucuronate isomerase. (474 aa)
AET60681.1Rhamnose isomerase like protein; COG4952 Predicted sugar isomerase. (406 aa)
AET60712.1COG2160 L-arabinose isomerase. (93 aa)
AET60713.1COG2160 L-arabinose isomerase. (81 aa)
AET60783.1Transcriptional regulator TenI; COG0352 Thiamine monophosphate synthase. (206 aa)
AET60800.1DNA topoisomerase III; COG0550 Topoisomerase IA. (769 aa)
rbsDRibose ABC transporter high affinity permease rbsd; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (140 aa)
AET60888.1COG2017 Galactose mutarotase and related enzymes. (339 aa)
AET60957.1COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog. (127 aa)
AET61009.1Beta-phosphoglucomutase; COG0637 Predicted phosphatase/phosphohexomutase. (161 aa)
AET61021.1COG1794 Aspartate racemase; Belongs to the aspartate/glutamate racemases family. (230 aa)
AET61098.1COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase. (236 aa)
AET61156.1Hypothetical protein; COG2407 L-fucose isomerase and related proteins. (485 aa)
AET61250.1RNA pseudouridine synthase family protein; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family. (210 aa)
AET61300.1COG0564 Pseudouridylate synthases, 23S RNA-specific. (248 aa)
AET61304.1COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. (820 aa)
AET61305.1DNA topoisomerase iv, b subunit; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit. (659 aa)
mtnW2,3-diketo-5-methylthiopentyl-1-phosphate enolase; COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit; Belongs to the RuBisCO large chain family. (403 aa)
trpFCOG0135 Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. (228 aa)
AET61395.1Chorismate mutase (CM); Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. (124 aa)
AET61435.1Pseudouridine synthase; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family. (252 aa)
AET61458.1Peptidyl-prolyl cis-trans isomerase b; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (144 aa)
AET61570.1Xylose isomerase domain protein tim barrel; COG1082 Sugar phosphate isomerases/epimerases. (322 aa)
AET61572.1COG1082 Sugar phosphate isomerases/epimerases. (255 aa)
AET61601.1Had-superfamily hydrolase, subfamily iib; COG0036 Pentose-5-phosphate-3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (221 aa)
dapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (277 aa)
AET61732.1RNA pseudouridine synthase ylyb; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (323 aa)
AET61860.1COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog. (128 aa)
AET62233.1UDP-glucose 4-epimerase (galactowaldenase) (UDP-galactose 4-epimerase); COG1087 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (329 aa)
Your Current Organism:
Paenibacillus terrae
NCBI taxonomy Id: 985665
Other names: P. terrae HPL-003, Paenibacillus sp. HPL-003, Paenibacillus terrae HPL-003, Paenibacillus terrae str. HPL-003, Paenibacillus terrae strain HPL-003
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