(5 nodes) Ubiquitin-dependent endocytosis network (Leptosphaeria maculans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LEMA_P045880.1	Similar to E3 ubiquitin-protein ligase RSP5. (506 aa)
	LEMA_P045870.1	C2 domain-containing protein. (152 aa)
	LEMA_P017130.1	Predicted protein. (805 aa)
	LEMA_P109150.1	Arrestin_C domain-containing protein. (794 aa)
	LEMA_P108200.1	Predicted protein. (451 aa)

Your Current Organism:

Leptosphaeria maculans

NCBI taxonomy Id: 985895
Other names: L. maculans JN3, Leptosphaeria maculans JN3, Leptosphaeria maculans v23.1.3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LEMA_P045870.1	LEMA_P108200.1	E5R4B3	E4ZYM9	C2 domain-containing protein.	Predicted protein.	0.865
LEMA_P045870.1	LEMA_P109150.1	E5R4B3	E4ZZ55	C2 domain-containing protein.	Arrestin_C domain-containing protein.	0.667
LEMA_P045880.1	LEMA_P108200.1	E5R4B4	E4ZYM9	Similar to E3 ubiquitin-protein ligase RSP5.	Predicted protein.	0.865
LEMA_P045880.1	LEMA_P109150.1	E5R4B4	E4ZZ55	Similar to E3 ubiquitin-protein ligase RSP5.	Arrestin_C domain-containing protein.	0.667
LEMA_P108200.1	LEMA_P045870.1	E4ZYM9	E5R4B3	Predicted protein.	C2 domain-containing protein.	0.865
LEMA_P108200.1	LEMA_P045880.1	E4ZYM9	E5R4B4	Predicted protein.	Similar to E3 ubiquitin-protein ligase RSP5.	0.865
LEMA_P108200.1	LEMA_P109150.1	E4ZYM9	E4ZZ55	Predicted protein.	Arrestin_C domain-containing protein.	0.709
LEMA_P109150.1	LEMA_P045870.1	E4ZZ55	E5R4B3	Arrestin_C domain-containing protein.	C2 domain-containing protein.	0.667
LEMA_P109150.1	LEMA_P045880.1	E4ZZ55	E5R4B4	Arrestin_C domain-containing protein.	Similar to E3 ubiquitin-protein ligase RSP5.	0.667
LEMA_P109150.1	LEMA_P108200.1	E4ZZ55	E4ZYM9	Arrestin_C domain-containing protein.	Predicted protein.	0.709