(35 nodes) Homeobox protein, antennapedia type, conserved site, and PBX, PBC domain network (Bos taurus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HOXA1	Homeobox A1. (333 aa)
	HOXC4	HOXC4 protein. (264 aa)
	HOXB7	Homeobox protein Hox-B7; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family. (217 aa)
	HOXC9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (260 aa)
	HOXB1	Homeobox B1. (302 aa)
	HOXA2	Homeobox protein Hox-A2; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family. Proboscipedia subfamily. (372 aa)
	HOXA3	Homeobox protein Hox-A3; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family. (442 aa)
	HOXC6	Homeobox C6. (231 aa)
	HOXC5	Homeobox C5. (222 aa)
	HOXC8	Homeobox C8. (242 aa)
	HOXA5	Homeobox protein Hox-A5; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Also binds to its own promoter. Binds specifically to the motif 5'-CYYNATTA[TG]Y-3' (By similarity); Belongs to the Antp homeobox family. (381 aa)
	PBX3	PBX homeobox 3. (434 aa)
	HOXB13	Homeobox B13. (285 aa)
	HOXA11	Homeobox A11. (316 aa)
	HOXD1	Homeobox D1. (322 aa)
	HOXB3	HOXB3 protein. (426 aa)
	HOXA6	Homeobox A6. (233 aa)
	HOXB4	Homeobox protein Hox-B4; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family. Deformed subfamily. (251 aa)
	HOXA13	Homeobox A13. (388 aa)
	HOXA10	HOXA10 protein. (94 aa)
	MEIS2	Meis homeobox 2. (477 aa)
	PBX2	PBX homeobox 2. (347 aa)
	HOXA4	Homeobox A4. (319 aa)
	HOXB5	Homeobox B5. (269 aa)
	HOXB9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (250 aa)
	PBX1	PBX homeobox 1. (325 aa)
	ENSBTAP00000062607	PBC domain-containing protein. (274 aa)
	HOXA7	Homeobox A7. (238 aa)
	HOXC10	Homeobox C10. (373 aa)
	ENSBTAP00000067409	PBC domain-containing protein. (117 aa)
	ENSBTAP00000068154	Uncharacterized protein. (197 aa)
	HOXB6	Homeobox B6. (224 aa)
	HOXB8	Homeobox B8. (243 aa)
	MEIS1	Meis homeobox 1. (465 aa)
	HOXA9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (272 aa)

Your Current Organism:

Bos taurus

NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSBTAP00000062607	HOXB1	ENSBTAP00000062607	ENSBTAP00000009997	PBC domain-containing protein.	Homeobox B1.	0.561
ENSBTAP00000062607	HOXB5	ENSBTAP00000062607	ENSBTAP00000054763	PBC domain-containing protein.	Homeobox B5.	0.623
ENSBTAP00000062607	HOXB6	ENSBTAP00000062607	ENSBTAP00000070780	PBC domain-containing protein.	Homeobox B6.	0.539
ENSBTAP00000062607	HOXB7	ENSBTAP00000062607	ENSBTAP00000007292	PBC domain-containing protein.	Homeobox protein Hox-B7; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family.	0.437
ENSBTAP00000062607	HOXB8	ENSBTAP00000062607	ENSBTAP00000072133	PBC domain-containing protein.	Homeobox B8.	0.522
ENSBTAP00000062607	HOXC4	ENSBTAP00000062607	ENSBTAP00000004277	PBC domain-containing protein.	HOXC4 protein.	0.497
ENSBTAP00000062607	HOXC8	ENSBTAP00000062607	ENSBTAP00000016117	PBC domain-containing protein.	Homeobox C8.	0.522
ENSBTAP00000062607	HOXC9	ENSBTAP00000062607	ENSBTAP00000007361	PBC domain-containing protein.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.646
ENSBTAP00000062607	MEIS1	ENSBTAP00000062607	ENSBTAP00000072915	PBC domain-containing protein.	Meis homeobox 1.	0.599
ENSBTAP00000062607	MEIS2	ENSBTAP00000062607	ENSBTAP00000053453	PBC domain-containing protein.	Meis homeobox 2.	0.599
ENSBTAP00000067409	HOXB1	ENSBTAP00000067409	ENSBTAP00000009997	PBC domain-containing protein.	Homeobox B1.	0.561
ENSBTAP00000067409	HOXB5	ENSBTAP00000067409	ENSBTAP00000054763	PBC domain-containing protein.	Homeobox B5.	0.623
ENSBTAP00000067409	HOXB6	ENSBTAP00000067409	ENSBTAP00000070780	PBC domain-containing protein.	Homeobox B6.	0.539
ENSBTAP00000067409	HOXB7	ENSBTAP00000067409	ENSBTAP00000007292	PBC domain-containing protein.	Homeobox protein Hox-B7; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family.	0.437
ENSBTAP00000067409	HOXB8	ENSBTAP00000067409	ENSBTAP00000072133	PBC domain-containing protein.	Homeobox B8.	0.522
ENSBTAP00000067409	HOXC4	ENSBTAP00000067409	ENSBTAP00000004277	PBC domain-containing protein.	HOXC4 protein.	0.497
ENSBTAP00000067409	HOXC8	ENSBTAP00000067409	ENSBTAP00000016117	PBC domain-containing protein.	Homeobox C8.	0.522
ENSBTAP00000067409	HOXC9	ENSBTAP00000067409	ENSBTAP00000007361	PBC domain-containing protein.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.646
ENSBTAP00000067409	MEIS1	ENSBTAP00000067409	ENSBTAP00000072915	PBC domain-containing protein.	Meis homeobox 1.	0.599
ENSBTAP00000067409	MEIS2	ENSBTAP00000067409	ENSBTAP00000053453	PBC domain-containing protein.	Meis homeobox 2.	0.599

page 1 of 27

Server load: low (14%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Neighborhood

© STRING Consortium 2025

Credits

Access

Info

About