STRINGSTRING
PHACTR1 PHACTR1 TBC1D24 TBC1D24 MAP1B MAP1B SRGAP2 SRGAP2 CRKL CRKL GRIP1 GRIP1 TPBG TPBG MECP2 MECP2 NTN5 NTN5 DCLK1 DCLK1 ITGB1 ITGB1 SHANK1 SHANK1 GHRL GHRL BAIAP2 BAIAP2 LOC112445816 LOC112445816 NFATC4 NFATC4 DOCK10 DOCK10 ACTL6A ACTL6A PRKG1 PRKG1 SYNGAP1 SYNGAP1 FEZF2 FEZF2 BBS1 BBS1 EPHB2 EPHB2 TMEM106B TMEM106B TULP1 TULP1 GRIN3A GRIN3A RERE RERE MAP2 MAP2 PREX2 PREX2 TAOK2 TAOK2 MAPK8IP2 MAPK8IP2 EPHB1 EPHB1 MAP1S MAP1S SS18L1 SS18L1 SLC12A5 SLC12A5 GPR37 GPR37 FYN FYN SCARF1 SCARF1 DVL1 DVL1 SLITRK5 SLITRK5 DCDC2 DCDC2 KLHL1 KLHL1 TRAPPC4 TRAPPC4 CDK5 CDK5 BBS4 BBS4 UBA6 UBA6 CRK CRK EPHB3 EPHB3 ABITRAM ABITRAM WASL WASL FAT3 FAT3 RELN RELN DLG4 DLG4 WNT7A WNT7A MAP6 MAP6 ABI1 ABI1 IGSF9 IGSF9 MEF2A MEF2A HDAC6 HDAC6 PICALM PICALM PAK4 PAK4 CTNND2 CTNND2 CAMK2A CAMK2A SDC2 SDC2 MAP1A MAP1A LAMC2 LAMC2 ELAVL4 ELAVL4 PPP3CA PPP3CA DSCAM DSCAM ZNF365 ZNF365 VLDLR VLDLR RBFOX2 RBFOX2 BTBD3 BTBD3 KLF7 KLF7 ENSBTAP00000066257 ENSBTAP00000066257 MCF2 MCF2 ACTL6B ACTL6B PAK2 PAK2 PPP1R9B PPP1R9B NTN1 NTN1 APP APP DCX DCX PTN PTN PAK3 PAK3 CDC42 CDC42 DTNBP1 DTNBP1 LRP8 LRP8 NTN3 NTN3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PHACTR1Phosphatase and actin regulator. (609 aa)
TBC1D24TBC1 domain family member 24; May act as a GTPase-activating protein for Rab family protein(s). Involved in neuronal projections development, probably through a negative modulation of ARF6 function. (559 aa)
MAP1BMicrotubule associated protein 1B. (2463 aa)
SRGAP2Uncharacterized protein. (1071 aa)
CRKLCRK like proto-oncogene, adaptor protein. (302 aa)
GRIP1Glutamate receptor interacting protein 1. (1107 aa)
TPBGTrophoblast glycoprotein. (420 aa)
MECP2Methyl-CpG-binding protein 2; Chromosomal protein that binds to methylated DNA. It can bind specifically to a single methyl-CpG pair. It is not influenced by sequences flanking the methyl-CpGs. Binds both 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC)-containing DNA, with a preference for 5-methylcytosine (5mC). (498 aa)
NTN5Netrin 5. (489 aa)
DCLK1Doublecortin like kinase 1; Belongs to the protein kinase superfamily. (423 aa)
ITGB1Integrin beta-1; Integrins alpha-1/beta-1, alpha-2/beta-1, alpha-10/beta-1 and alpha-11/beta-1 are receptors for collagen. Integrins alpha-1/beta-1 and alpha-2/beta-2 recognize the proline-hydroxylated sequence G-F-P-G- E-R in collagen. Integrins alpha-2/beta-1, alpha-3/beta-1, alpha- 4/beta-1, alpha-5/beta-1, alpha-8/beta-1, alpha-10/beta-1, alpha- 11/beta-1 and alpha-V/beta-1 are receptors for fibronectin. Alpha- 4/beta-1 recognizes one or more domains within the alternatively spliced CS-1 and CS-5 regions of fibronectin. Integrin alpha-5/beta-1 is a receptor for fibrinogen. Integrin [...] (802 aa)
SHANK1SH3 and multiple ankyrin repeat domains 1. (2147 aa)
GHRLAppetite-regulating hormone; Ghrelin is the ligand for growth hormone secretagogue receptor type 1 (GHSR). Induces the release of growth hormone from the pituitary. Has an appetite-stimulating effect, induces adiposity and stimulates gastric acid secretion. Involved in growth regulation (By similarity). (133 aa)
BAIAP2Brain-specific angiogenesis inhibitor 1-associated protein 2; Adapter protein that links membrane-bound small G-proteins to cytoplasmic effector proteins. Necessary for CDC42-mediated reorganization of the actin cytoskeleton and for RAC1-mediated membrane ruffling. Involved in the regulation of the actin cytoskeleton by WASF family members and the Arp2/3 complex. Plays a role in neurite growth. Acts syngeristically with ENAH to promote filipodia formation. Plays a role in the reorganization of the actin cytoskeleton in response to bacterial infection. Participates in actin bundling whe [...] (535 aa)
LOC112445816Uncharacterized protein. (978 aa)
NFATC4Nuclear factor of activated T cells 4. (901 aa)
DOCK10Dedicator of cytokinesis 10; Belongs to the DOCK family. (2199 aa)
ACTL6AActin-like protein 6B; Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Component of SWI/SNF chromatin remodeling complexes that carry out key enzymatic activities, changing chromatin structure by altering DNA-histone contacts within a nucleosome in an ATP-dependent manner. Belongs to the neuron-specific chromatin remodeling complex (nBAF complex), as such plays a role in remodeling mononucleosomes in an ATP-dependent fashion, and is required for postmitotic neural development and dendritic outgrowth. [...] (429 aa)
PRKG1cGMP-dependent protein kinase 1; Serine/threonine protein kinase that acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-s [...] (686 aa)
SYNGAP1Synaptic Ras GTPase activating protein 1. (1346 aa)
FEZF2Fez family zinc finger protein 2; Transcription repressor. Binds to 5'GCAG-3' core sequence. Required for the specification of corticospinal motor neurons and other subcerebral projection neurons. May play a role in layer and neuronal subtype-specific patterning of subcortical projections and axonal fasciculation. Controls the development of dendritic arborization and spines of large layer V pyramidal neurons (By similarity). May be responsible for mastitis resistance and innate immunity. (459 aa)
BBS1BBS1 domain-containing protein. (667 aa)
EPHB2EPH receptor B2. (965 aa)
TMEM106BTransmembrane protein 106B; Involved in dendrite morphogenesis and maintenance by regulating lysosomal trafficking via its interaction with MAP6. May act by inhibiting retrograde transport of lysosomes along dendrites. Required for dendrite branching (By similarity). (275 aa)
TULP1Tubby-like protein; Belongs to the TUB family. (546 aa)
GRIN3AGlutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1115 aa)
REREArginine-glutamic acid dipeptide repeats. (1536 aa)
MAP2Microtubule-associated protein. (2008 aa)
PREX2Phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2. (1605 aa)
TAOK2TAO kinase 2. (1049 aa)
MAPK8IP2Mitogen-activated protein kinase 8 interacting protein 2. (821 aa)
EPHB1EPH receptor B1. (984 aa)
MAP1SMicrotubule-associated protein 1S; Microtubule-associated protein that mediates aggregation of mitochondria resulting in cell death and genomic destruction (MAGD). Plays a role in anchoring the microtubule organizing center to the centrosomes. Binds to DNA. Plays a role in apoptosis. Involved in the formation of microtubule bundles (By similarity); Belongs to the MAP1 family. (1066 aa)
SS18L1Calcium-responsive transactivator; Transcriptional activator which is required for calcium- dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is depho [...] (402 aa)
SLC12A5Solute carrier family 12 member 5. (1116 aa)
GPR37G protein-coupled receptor 37 (Endothelin receptor type B-like). (613 aa)
FYNTyrosine-protein kinase Fyn; Non-receptor tyrosine-protein kinase that plays a role in many biological processes including regulation of cell growth and survival, cell adhesion, integrin-mediated signaling, cytoskeletal remodeling, cell motility, immune response and axon guidance. Inactive FYN is phosphorylated on its C-terminal tail within the catalytic domain. Following activation by PKA, the protein subsequently associates with PTK2/FAK1, allowing PTK2/FAK1 phosphorylation, activation and targeting to focal adhesions. Involved in the regulation of cell adhesion and motility through [...] (537 aa)
SCARF1Scavenger receptor class F member 1. (932 aa)
DVL1Uncharacterized protein. (700 aa)
SLITRK5SLIT and NTRK like family member 5. (962 aa)
DCDC2Doublecortin domain containing 2. (475 aa)
KLHL1Kelch like family member 1. (750 aa)
TRAPPC4Trafficking protein particle complex subunit 4; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (219 aa)
CDK5Cyclin-dependent-like kinase 5; Proline-directed serine/threonine-protein kinase essential for neuronal cell cycle arrest and differentiation and may be involved in apoptotic cell death in neuronal diseases by triggering abortive cell cycle re-entry. Interacts with D1 and D3-type G1 cyclins. Phosphorylates SRC, NOS3, VIM/vimentin, p35/CDK5R1, MEF2A, SIPA1L1, SH3GLB1, PXN, PAK1, MCAM/MUC18, SEPT5, SYN1, DNM1, AMPH, SYNJ1, CDK16, RAC1, RHOA, CDC42, TONEBP/NFAT5, MAPT/TAU, MAP1B, histone H1, p53/TP53, HDAC1, APEX1, PTK2/FAK1, huntingtin/HTT, ATM, MAP2, NEFH and NEFM. Regulates several neu [...] (292 aa)
BBS4Bardet-Biedl syndrome 4 protein homolog; May be required for the dynein-mediated transport of pericentriolar proteins to the centrosome. Required for microtubule anchoring at the centrosome but not for microtubule nucleation. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This ciliogenic function is mediated in part by the Rab8 GDP/GTP exchange factor, which localizes to the basal body and contacts the BBSome. Rab8(GTP) enters the primary cilium and promotes extension of the ciliary membrane. Firstly the BBSome associates with the [...] (519 aa)
UBA6Ubiquitin like modifier activating enzyme 6. (1057 aa)
CRKCRK proto-oncogene, adaptor protein. (304 aa)
EPHB3EPH receptor B3. (997 aa)
ABITRAMProtein Abitram; Actin-binding protein that regulates actin polymerization, filopodia dynamics and increases the branching of proximal dendrites of developing neurons. May play a role in transcription regulation. (187 aa)
WASLNeural Wiskott-Aldrich syndrome protein; Regulates actin polymerization by stimulating the actin- nucleating activity of the Arp2/3 complex. Involved in various processes, such as mitosis and cytokinesis, via its role in the regulation of actin polymerization. Together with CDC42, involved in the extension and maintenance of the formation of thin, actin-rich surface projections called filopodia. In addition to its role in the cytoplasm, also plays a role in the nucleus by regulating gene transcription, probably by promoting nuclear actin polymerization (By similarity). Binds to HSF1/HS [...] (505 aa)
FAT3FAT atypical cadherin 3. (4555 aa)
RELNReelin; Extracellular matrix serine protease that plays a role in layering of neurons in the cerebral cortex and cerebellum. Regulates microtubule function in neurons and neuronal migration. Affects migration of sympathetic preganglionic neurons in the spinal cord, where it seems to act as a barrier to neuronal migration. Enzymatic activity is important for the modulation of cell adhesion. Binding to the extracellular domains of lipoprotein receptors VLDLR and LRP8/APOER2 induces tyrosine phosphorylation of DAB1 and modulation of TAU phosphorylation (By similarity); Belongs to the reel [...] (3460 aa)
DLG4Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family. (721 aa)
WNT7AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (349 aa)
MAP6Microtubule associated protein 6. (1160 aa)
ABI1Abl interactor 1. (481 aa)
IGSF9Immunoglobulin superfamily member 9. (1179 aa)
MEF2AMyocyte-specific enhancer factor 2A; Transcriptional activator which binds specifically to the MEF2 element, 5'-YTA[AT](4)TAR-3', found in numerous muscle-specific genes. Also involved in the activation of numerous growth factor- and stress-induced genes. Mediates cellular functions not only in skeletal and cardiac muscle development, but also in neuronal differentiation and survival. Plays diverse roles in the control of cell growth, survival and apoptosis via p38 MAPK signaling in muscle-specific and/or growth factor-related transcription. In cerebellar granule neurons, phosphorylate [...] (498 aa)
HDAC6Histone deacetylase 6. (1129 aa)
PICALMPhosphatidylinositol binding clathrin assembly protein. (686 aa)
PAK4Non-specific serine/threonine protein kinase. (593 aa)
CTNND2Catenin delta 2. (1228 aa)
CAMK2ACalcium/calmodulin dependent protein kinase II alpha; Belongs to the protein kinase superfamily. (489 aa)
SDC2Syndecan-2; Cell surface proteoglycan that bears heparan sulfate. Regulates dendritic arbor morphogenesis (By similarity). (496 aa)
MAP1AMicrotubule associated protein 1A. (3122 aa)
LAMC2Laminin subunit gamma 2. (1191 aa)
ELAVL4ELAV-like protein; Belongs to the RRM elav family. (371 aa)
PPP3CASerine/threonine-protein phosphatase 2B catalytic subunit alpha isoform; Calcium-dependent, calmodulin-stimulated protein phosphatase which plays an essential role in the transduction of intracellular Ca(2+)-mediated signals. Many of the substrates contain a PxIxIT motif and/or a LxVP motif (By similarity). In response to increased Ca(2+) levels, dephosphorylates and activates phosphatase SSH1 which results in cofilin dephosphorylation (By similarity). In response to increased Ca(2+) levels following mitochondrial depolarization, dephosphorylates DNM1L inducing DNM1L translocation to t [...] (527 aa)
DSCAMDS cell adhesion molecule. (1858 aa)
ZNF365Zinc finger protein 365. (421 aa)
VLDLRVery low density lipoprotein receptor. (873 aa)
RBFOX2RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events by binding to 5'-UGCAUGU-3' elements. Prevents binding of U2AF2 to the 3'-splice site. Regulates alternative splicing of tissue- specific exons and of differentially spliced exons during erythropoiesis. Seems to act as a coregulatory factor of ER-alpha (By similarity). (451 aa)
BTBD3BTB domain containing 3. (526 aa)
KLF7Kruppel like factor 7. (328 aa)
ENSBTAP00000066257Uncharacterized protein. (108 aa)
MCF2MCF.2 cell line derived transforming sequence. (1021 aa)
ACTL6BActin-like protein 6B; Belongs to the actin family. (702 aa)
PAK2Non-specific serine/threonine protein kinase. (524 aa)
PPP1R9BProtein phosphatase 1 regulatory subunit 9B. (817 aa)
NTN1Netrin 1. (603 aa)
APPGamma-secretase C-terminal fragment 57; Functions as a cell surface receptor and performs physiological functions on the surface of neurons relevant to neurite growth, neuronal adhesion and axonogenesis. Interaction between APP molecules on neighboring cells promotes synaptogenesis. Involved in cell mobility and transcription regulation through protein-protein interactions (By similarity). Can promote transcription activation through binding to APBB1-KAT5 and inhibit Notch signaling through interaction with Numb (By similarity). Couples to apoptosis-inducing pathways such as those medi [...] (770 aa)
DCXDoublecortin. (360 aa)
PTNPleiotrophin; Secreted growth factor that mediates its signal through cell- surface proteoglycan and non-proteoglycan receptors. Binds cell-surface proteoglycan receptor via their chondroitin sulfate (CS) groups. Thereby regulates many processes like cell proliferation, cell survival, cell growth, cell differentiation and cell migration in several tissues namely neuron and bone (By similarity). Also plays a role in synaptic plasticity and learning- related behavior by inhibiting long-term synaptic potentiation (By similarity). Binds PTPRZ1, leading to neutralization of the negative ch [...] (182 aa)
PAK3P21 (RAC1) activated kinase 3. (580 aa)
CDC42Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. In neurons, plays a role in the extension and maintenance of the formation of filopodia, thin and actin-rich surface projections (By similarity). Require [...] (191 aa)
DTNBP1Dysbindin; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. Associates with the BLOC-2 complex to facilitate the transport of TYRP1 independent of AP-3 function. Plays a role i [...] (352 aa)
LRP8LDL receptor related protein 8. (1014 aa)
NTN3Netrin 3. (567 aa)
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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