STRINGSTRING
EMX2 EMX2 LHX5 LHX5 MEOX2 MEOX2 HOXC4 HOXC4 VSX1 VSX1 LHX4 LHX4 SIX2 SIX2 HOXD13 HOXD13 HOXD12 HOXD12 BARX1 BARX1 PRRX1 PRRX1 PITX1 PITX1 MNX1 MNX1 HOXD3 HOXD3 LHX6 LHX6 HOXB7 HOXB7 HOXC9 HOXC9 HOXB4 HOXB4 OTX2 OTX2 HOXA11 HOXA11 HOXB13 HOXB13 ZFHX3 ZFHX3 VSX2 VSX2 HLX HLX HHEX HHEX BSX BSX MSX2 MSX2 NKX2-8 NKX2-8 SIX5 SIX5 PBX3 PBX3 HOXA5 HOXA5 HOXC8 HOXC8 SIX1 SIX1 CDX1 CDX1 DRGX DRGX NKX2-4 NKX2-4 GBX1 GBX1 TLX1 TLX1 LHX2 LHX2 NKX3-2 NKX3-2 MSX1 MSX1 PDX1 PDX1 VAX2 VAX2 GSC GSC NKX2-2 NKX2-2 TLX3 TLX3 HOXB2 HOXB2 PAX3 PAX3 RAX2 RAX2 HOXC5 HOXC5 DMBX1 DMBX1 OTP OTP HOXC6 HOXC6 PITX2 PITX2 GBX2 GBX2 POU2F2 POU2F2 HOXA3 HOXA3 HOXA2 HOXA2 ISX ISX HOXB1 HOXB1 PROP1 PROP1 DLX4 DLX4 ZFHX2 ZFHX2 HOXC11 HOXC11 DBX2 DBX2 ESX1 ESX1 BARHL2 BARHL2 POU4F2 POU4F2 PAX7 PAX7 ALX1 ALX1 DLX1 DLX1 PITX3 PITX3 POU3F4 POU3F4 HOXD1 HOXD1 IRX4 IRX4 HOXD10 HOXD10 HOXD9 HOXD9 IRX6 IRX6 ISL2 ISL2 DLX3 DLX3 HMX2 HMX2 DLX5 DLX5 POU4F3 POU4F3 PHOX2A PHOX2A LHX8 LHX8 NKX2-5 NKX2-5 BARX2 BARX2 NANOG NANOG NKX1-2 NKX1-2 EVX1 EVX1 ALX3 ALX3 POU5F1 POU5F1 CRX CRX POU2F3 POU2F3 NKX2-3 NKX2-3 HOXB3 HOXB3 DLX6 DLX6 HOXD4 HOXD4 EN2 EN2 CUX2 CUX2 RAX RAX BARHL1 BARHL1 VAX1 VAX1 LBX1 LBX1 HOXA6 HOXA6 POU3F2 POU3F2 SHOX SHOX EN1 EN1 POU4F1 POU4F1 HOXA9 HOXA9 LMX1A LMX1A HESX1 HESX1 HOXB8 HOXB8 OTX1 OTX1 HOXB6 HOXB6 CUX1 CUX1 NKX2-1 NKX2-1 NKX6-2 NKX6-2 HOXD8 HOXD8 SIX4 SIX4 LMX1B LMX1B POU2F1 POU2F1 HOXC10 HOXC10 NKX1-1 NKX1-1 IRX5 IRX5 PAX6 PAX6 HOXA7 HOXA7 PBX1 PBX1 PAX4 PAX4 IRX3 IRX3 MKX MKX HOXB9 HOXB9 POU3F3 POU3F3 EVX2 EVX2 GSX2 GSX2 IRX2 IRX2 G3N017_BOVIN G3N017_BOVIN GSC2 GSC2 HOXB5 HOXB5 POU3F1 POU3F1 HOXA4 HOXA4 G3MWG9_BOVIN G3MWG9_BOVIN PBX2 PBX2 ZFHX4 ZFHX4 PHOX2B PHOX2B HOXD11 HOXD11 LHX3 LHX3 HOXA10 HOXA10 NKX2-6 NKX2-6 HMX1 HMX1 POU1F1 POU1F1 MEOX1 MEOX1 LHX1 LHX1 CDX2 CDX2 NKX6-3 NKX6-3 ALX4 ALX4 MIXL1 MIXL1 DLX2 DLX2 HOXA13 HOXA13 HMX3 HMX3 SHOX2 SHOX2 LHX9 LHX9 IRX1 IRX1 HOXC13 HOXC13 HOXC12 HOXC12 HOXA1 HOXA1 NKX3-1 NKX3-1 ISL1 ISL1 CDX4 CDX4 EMX1 EMX1 NKX6-1 NKX6-1 DBX1 DBX1 PRRX2 PRRX2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EMX2Homeobox protein EMX2; Transcription factor, which in cooperation with EMX2, acts to generate the boundary between the roof and archipallium in the developing brain. May function in combinations with OTX1/2 to specify cell fates in the developing central nervous system (By similarity). (253 aa)
LHX5LIM homeobox 5. (402 aa)
MEOX2Mesenchyme homeobox 2. (303 aa)
HOXC4HOXC4 protein. (264 aa)
VSX1Visual system homeobox 1; Binds to the 37-bp core of the locus control region (LCR) of the red/green visual pigment gene cluster (By similarity). May regulate the activity of the LCR and the cone opsin genes at earlier stages of development (By similarity). Dispensable in early retinal development (By similarity). (365 aa)
LHX4LIM homeobox 4. (390 aa)
SIX2SIX homeobox 2. (296 aa)
HOXD13Homeobox D13. (341 aa)
HOXD12Homeobox D12. (269 aa)
BARX1BARX homeobox 1. (254 aa)
PRRX1Paired related homeobox 1. (245 aa)
PITX1Homeobox protein. (314 aa)
MNX1Motor neuron and pancreas homeobox 1. (409 aa)
HOXD3Homeobox D3. (434 aa)
LHX6LIM homeobox 6. (392 aa)
HOXB7Homeobox protein Hox-B7; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family. (217 aa)
HOXC9Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (260 aa)
HOXB4Homeobox protein Hox-B4; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family. Deformed subfamily. (251 aa)
OTX2Orthodenticle homeobox 2. (289 aa)
HOXA11Homeobox A11. (316 aa)
HOXB13Homeobox B13. (285 aa)
ZFHX3Zinc finger homeobox 3. (3704 aa)
VSX2Visual system homeobox 2. (361 aa)
HLXH2.0-like homeobox protein; Transcription factor required for TBX21/T-bet-dependent maturation of Th1 cells as well as maintenance of Th1-specific gene expression. Involved in embryogenesis and hematopoiesis (By similarity); Belongs to the H2.0 homeobox family. (486 aa)
HHEXHematopoietically expressed homeobox. (271 aa)
BSXBrain specific homeobox. (232 aa)
MSX2Homeobox protein MSX-2; Acts as a transcriptional regulator in bone development. Represses the ALPL promoter activity and antagonizes the stimulatory effect of DLX5 on ALPL expression during osteoblast differentiation. Probable morphogenetic role. May play a role in limb-pattern formation. In osteoblasts, suppresses transcription driven by the osteocalcin FGF response element (OCFRE). Binds to the homeodomain-response element of the ALPL promoter (By similarity). (267 aa)
NKX2-8NK2 homeobox 8. (237 aa)
SIX5SIX homeobox 5. (738 aa)
PBX3PBX homeobox 3. (434 aa)
HOXA5Homeobox protein Hox-A5; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Also binds to its own promoter. Binds specifically to the motif 5'-CYYNATTA[TG]Y-3' (By similarity); Belongs to the Antp homeobox family. (381 aa)
HOXC8Homeobox C8. (242 aa)
SIX1SIX homeobox 1. (284 aa)
CDX1CDX1 protein. (265 aa)
DRGXDorsal root ganglia homeobox. (263 aa)
NKX2-4NK2 homeobox 4. (347 aa)
GBX1Gastrulation brain homeobox 1. (406 aa)
TLX1Homeobox domain-containing protein. (335 aa)
LHX2LIM homeobox 2. (406 aa)
NKX3-2NK3 homeobox 2. (330 aa)
MSX1Homeobox protein MSX-1; Acts as a transcriptional repressor. May play a role in limb- pattern formation. Acts in cranofacial development and specifically in odontogenesis (By similarity). (303 aa)
PDX1Pancreatic and duodenal homeobox 1. (285 aa)
VAX2Ventral anterior homeobox 2. (286 aa)
GSCGoosecoid homeobox. (257 aa)
NKX2-2NK2 homeobox 2. (273 aa)
TLX3Homeobox domain-containing protein. (291 aa)
HOXB2Homeobox B2. (354 aa)
PAX3Paired box 3. (484 aa)
RAX2Retina and anterior neural fold homeobox protein 2; May be involved in modulating the expression of photoreceptor specific genes. Binds to the Ret-1 and Bat-1 element within the rhodopsin promoter (By similarity). (184 aa)
HOXC5Homeobox C5. (222 aa)
DMBX1Diencephalon/mesencephalon homeobox 1. (374 aa)
OTPOrthopedia homeobox. (325 aa)
HOXC6Homeobox C6. (231 aa)
PITX2Homeobox protein. (325 aa)
GBX2Gastrulation brain homeobox 2. (349 aa)
POU2F2POU domain protein. (467 aa)
HOXA3Homeobox protein Hox-A3; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family. (442 aa)
HOXA2Homeobox protein Hox-A2; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family. Proboscipedia subfamily. (372 aa)
ISXIntestine specific homeobox. (246 aa)
HOXB1Homeobox B1. (302 aa)
PROP1Homeobox protein prophet of Pit-1; Possibly involved in the ontogenesis of pituitary gonadotropes, as well as somatotropes, lactotropes and caudomedial thyrotropes. (226 aa)
DLX4Distal-less homeobox 4. (234 aa)
ZFHX2Zinc finger homeobox 2. (2571 aa)
HOXC11Homeobox C11. (304 aa)
DBX2Homeobox protein DBX2. (340 aa)
ESX1ESX homeobox 1. (279 aa)
BARHL2BarH like homeobox 2. (380 aa)
POU4F2POU domain protein. (407 aa)
PAX7Paired box 7. (505 aa)
ALX1ALX homeobox 1. (295 aa)
DLX1Distal-less homeobox 1. (255 aa)
PITX3Homeobox protein. (302 aa)
POU3F4POU domain protein. (363 aa)
HOXD1Homeobox D1. (322 aa)
IRX4Iroquois homeobox 4. (522 aa)
HOXD10HOXD10 protein. (340 aa)
HOXD9Homeobox D9. (345 aa)
IRX6Iroquois homeobox 6. (445 aa)
ISL2ISL LIM homeobox 2. (359 aa)
DLX3Distal-less homeobox 3. (287 aa)
HMX2H6 family homeobox 2. (274 aa)
DLX5Distal-less homeobox 5. (289 aa)
POU4F3POU domain protein. (338 aa)
PHOX2APaired like homeobox 2A. (284 aa)
LHX8LIM homeobox 8. (377 aa)
NKX2-5NK2 transcription factor related, locus 5 (Drosophila). (323 aa)
BARX2BARX homeobox 2. (278 aa)
NANOGHomeobox protein NANOG; Transcription regulator involved in inner cell mass and embryonic stem (ES) cells proliferation and self-renewal. Imposes pluripotency on ES cells and prevents their differentiation towards extraembryonic endoderm and trophectoderm lineages. Blocks bone morphogenetic protein-induced mesoderm differentiation of ES cells by physically interacting with SMAD1 and interfering with the recruitment of coactivators to the active SMAD transcriptional complexes. Acts as a transcriptional activator and repressor. Binds optimally to the DNA consensus sequence 5'-TAAT[GT][GT [...] (300 aa)
NKX1-2NK1 homeobox 2. (301 aa)
EVX1Even-skipped homeobox 1. (404 aa)
ALX3ALX homeobox 3. (343 aa)
POU5F1POU domain, class 5, transcription factor 1; Transcription factor that binds to the octamer motif (5'- ATTTGCAT-3'). Forms a trimeric complex with SOX2 or SOX15 on DNA and controls the expression of a number of genes involved in embryonic development such as YES1, FGF4, UTF1 and ZFP206. Critical for early embryogenesis and for embryonic stem cell pluripotency (By similarity). Belongs to the POU transcription factor family. Class-5 subfamily. (360 aa)
CRXCone-rod homeobox protein; Transcription factor that binds and transactivates the sequence 5'-TAATC[CA]-3' which is found upstream of several photoreceptor-specific genes, including the opsin genes. Acts synergistically with other transcription factors, such as NRL, RORB and RAX, to regulate photoreceptor cell-specific gene transcription. Essential for the maintenance of mammalian photoreceptors (By similarity). (299 aa)
POU2F3POU domain protein. (429 aa)
NKX2-3NK2 transcription factor related, locus 3 (Drosophila). (367 aa)
HOXB3HOXB3 protein. (426 aa)
DLX6Distal-less homeobox 6. (175 aa)
HOXD4HOXD4 protein. (258 aa)
EN2Homeobox protein engrailed-like. (324 aa)
CUX2Homeobox protein cut-like. (1502 aa)
RAXRetina and anterior neural fold homeobox. (352 aa)
BARHL1BarH like homeobox 1. (327 aa)
VAX1Ventral anterior homeobox 1. (334 aa)
LBX1Ladybird homeobox 1. (282 aa)
HOXA6Homeobox A6. (233 aa)
POU3F2POU domain protein. (438 aa)
SHOXShort stature homeobox. (306 aa)
EN1Homeobox protein engrailed-like. (400 aa)
POU4F1POU domain protein. (421 aa)
HOXA9Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (272 aa)
LMX1ALIM homeobox transcription factor 1 alpha. (382 aa)
HESX1HESX homeobox 1. (201 aa)
HOXB8Homeobox B8. (243 aa)
OTX1Orthodenticle homeobox 1. (355 aa)
HOXB6Homeobox B6. (224 aa)
CUX1Homeobox protein cut-like. (1648 aa)
NKX2-1NK2 homeobox 1. (408 aa)
NKX6-2NK6 homeobox 2. (278 aa)
HOXD8Homeobox D8. (277 aa)
SIX4SIX homeobox 4. (786 aa)
LMX1BLIM homeobox transcription factor 1 beta. (395 aa)
POU2F1POU domain protein. (768 aa)
HOXC10Homeobox C10. (373 aa)
NKX1-1NK1 homeobox 1. (399 aa)
IRX5Iroquois homeobox 5. (500 aa)
PAX6Paired box protein Pax-6; Transcription factor with important functions in the development of the eye, nose, central nervous system and pancreas. Required for the differentiation of pancreatic islet alpha cells. Competes with PAX4 in binding to a common element in the glucagon, insulin and somatostatin promoters. Regulates specification of the ventral neuron subtypes by establishing the correct progenitor domains (By similarity); Belongs to the paired homeobox family. (436 aa)
HOXA7Homeobox A7. (238 aa)
PBX1PBX homeobox 1. (325 aa)
PAX4Paired box 4. (368 aa)
IRX3Iroquois homeobox 3. (502 aa)
MKXMohawk homeobox. (352 aa)
HOXB9Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (250 aa)
POU3F3POU domain protein. (499 aa)
EVX2Even-skipped homeobox 2. (474 aa)
GSX2GS homeobox 2. (305 aa)
IRX2Iroquois homeobox 2. (476 aa)
G3N017_BOVINHomeobox domain-containing protein. (234 aa)
GSC2Goosecoid homeobox 2. (213 aa)
HOXB5Homeobox B5. (269 aa)
POU3F1POU domain protein. (451 aa)
HOXA4Homeobox A4. (319 aa)
G3MWG9_BOVINHomeobox domain-containing protein. (262 aa)
PBX2PBX homeobox 2. (347 aa)
ZFHX4Zinc finger homeobox 4. (3622 aa)
PHOX2BPaired like homeobox 2B. (315 aa)
HOXD11Homeobox D11. (337 aa)
LHX3LIM homeodomain 3 protein b isoform. (403 aa)
HOXA10HOXA10 protein. (94 aa)
NKX2-6NK2 homeobox 6. (300 aa)
HMX1H6 family homeobox 1. (347 aa)
POU1F1Pituitary-specific positive transcription factor 1; Transcription factor involved in the specification of the lactotrope, somatotrope, and thyrotrope phenotypes in the developing anterior pituitary. Activates growth hormone and prolactin genes. Specifically binds to the consensus sequence 5'-TAAAT-3'. (291 aa)
MEOX1Mesenchyme homeobox 1. (254 aa)
LHX1LIM homeobox 1. (406 aa)
CDX2Homeobox domain-containing protein. (306 aa)
NKX6-3NK6 homeobox 3. (263 aa)
ALX4Homeobox protein aristaless-like 4; Transcription factor involved in skull and limb development. (397 aa)
MIXL1Mix paired-like homeobox. (237 aa)
DLX2Distal-less homeobox 2. (331 aa)
HOXA13Homeobox A13. (388 aa)
HMX3H6 family homeobox 3. (359 aa)
SHOX2Short stature homeobox 2. (353 aa)
LHX9LIM/homeobox protein Lhx9; Involved in gonadal development. (378 aa)
IRX1Iroquois homeobox 1. (476 aa)
HOXC13HOXC13 protein. (330 aa)
HOXC12Homeobox C12. (281 aa)
HOXA1Homeobox A1. (333 aa)
NKX3-1NK3 homeobox 1. (239 aa)
ISL1ISL LIM homeobox 1. (349 aa)
CDX4Caudal type homeobox 4. (274 aa)
EMX1Empty spiracles homeobox 1. (288 aa)
NKX6-1NK6 homeobox 1. (366 aa)
DBX1Homeobox protein DBX1; Could have a role in patterning the central nervous system during embryogenesis. Has a key role in regulating the distinct phenotypic features that distinguish two major classes of ventral interneurons, V0 and V1 neurons. Regulates the transcription factor profile, neurotransmitter phenotype, intraspinal migratory path and axonal trajectory of V0 neurons, features that differentiate them from an adjacent set of V1 neurons (By similarity); Belongs to the H2.0 homeobox family. (345 aa)
PRRX2Paired related homeobox 2. (254 aa)
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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