STRINGSTRING
hisB hisB ADZ68448.1 ADZ68448.1 hisH hisH ADZ68450.1 ADZ68450.1 hisA hisA hisF hisF hisE hisE trpA trpA trpB trpB trpF trpF aroE-2 aroE-2 leuC leuC ADZ68534.1 ADZ68534.1 argH argH lysA lysA ADZ68582.1 ADZ68582.1 ADZ68589.1 ADZ68589.1 argC argC leuD leuD dapF dapF ADZ68651.1 ADZ68651.1 hisC hisC ADZ68653.1 ADZ68653.1 argG argG ADZ68681.1 ADZ68681.1 ADZ68682.1 ADZ68682.1 aroB aroB aroK aroK ADZ68785.1 ADZ68785.1 ADZ68786.1 ADZ68786.1 asd asd leuB leuB argJ argJ ADZ68908.1 ADZ68908.1 ADZ68977.1 ADZ68977.1 ADZ69197.1 ADZ69197.1 ADZ69277.1 ADZ69277.1 gltB gltB ADZ69283.1 ADZ69283.1 ADZ69514.1 ADZ69514.1 ADZ69549.1 ADZ69549.1 proC proC ilvE-2 ilvE-2 aatA aatA katG katG ADZ69747.1 ADZ69747.1 ADZ69813.1 ADZ69813.1 leuA leuA ilvC ilvC ilvH ilvH ADZ69833.1 ADZ69833.1 ADZ69915.1 ADZ69915.1 hisI hisI dapA-2 dapA-2 ADZ70334.1 ADZ70334.1 amiF amiF aroQ aroQ glnA3 glnA3 ADZ70485.1 ADZ70485.1 trpC trpC trpD trpD ADZ70697.1 ADZ70697.1 ADZ70948.1 ADZ70948.1 ADZ70950.1 ADZ70950.1 ADZ70951.1 ADZ70951.1 trpE trpE ADZ71082.1 ADZ71082.1 ilvD ilvD leuA1 leuA1 ADZ71173.1 ADZ71173.1 ilvE ilvE ADZ71303.1 ADZ71303.1 ADZ71358.1 ADZ71358.1 ADZ71401.1 ADZ71401.1 ADZ71418.1 ADZ71418.1 hisD hisD dapB dapB dapA dapA ilvB ilvB ilvD-2 ilvD-2 ADZ71590.1 ADZ71590.1 aroE aroE argF argF argD argD aroC aroC ADZ71740.1 ADZ71740.1 thrC thrC hisZ hisZ hisG hisG ADZ71912.1 ADZ71912.1 ilvG ilvG ADZ71935.1 ADZ71935.1 ADZ71945.1 ADZ71945.1 ADZ71947.1 ADZ71947.1 ipuC ipuC ADZ72008.1 ADZ72008.1 ADZ72012.1 ADZ72012.1 argB argB dapD dapD dapE dapE ADZ72122.1 ADZ72122.1 leuD-2 leuD-2 ADZ72253.1 ADZ72253.1 ADZ72261.1 ADZ72261.1 proB proB proA proA aroA aroA glnD glnD ADZ72711.1 ADZ72711.1 dapB-2 dapB-2
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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hisBImidazoleglycerol-phosphate dehydratase. (197 aa)
ADZ68448.1Hypothetical protein. (173 aa)
hisHImidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (217 aa)
ADZ68450.1Hypothetical conserved protein. (95 aa)
hisA1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. (248 aa)
hisFImidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. (259 aa)
hisEPhosphoribosyl-ATP pyrophosphatase. (107 aa)
trpATryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (278 aa)
trpBTryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (414 aa)
trpFN-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. (226 aa)
aroE-2Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (281 aa)
leuC3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (475 aa)
ADZ68534.1Chorismate mutase protein. (114 aa)
argHArgininosuccinate lyase 1. (457 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (424 aa)
ADZ68582.1Aminotransferase, classes I and II superfamily. (412 aa)
ADZ68589.1Bacterial NAD-glutamate dehydrogenase superfamily. (1601 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase 2; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. (316 aa)
leuD3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (201 aa)
dapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (304 aa)
ADZ68651.1Prephenate dehydrogenase protein. (305 aa)
hisCHistidinol-phosphate aminotransferase 2; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (371 aa)
ADZ68653.1Chorismate mutase. (294 aa)
argGArgininosuccinate synthase 2; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (406 aa)
ADZ68681.1Glutamine synthetase activity regulation protein; Belongs to the P(II) protein family. (112 aa)
ADZ68682.1Ammonium transporter. (469 aa)
aroBShikimate kinase, 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). (363 aa)
aroKShikimate kinase, 3-dehydroquinate synthase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (209 aa)
ADZ68785.1Conserved domain protein. (333 aa)
ADZ68786.1Nitrogen regulatory protein P-II. (103 aa)
asdAspartate-B-semialdehyde dehydrogenase protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (344 aa)
leuB3-isopropylmalate dehydrogenase 2; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. (370 aa)
argJBifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. (413 aa)
ADZ68908.1Aspartokinase; Belongs to the aspartokinase family. (416 aa)
ADZ68977.1Hypothetical protein; Belongs to the TPP enzyme family. (550 aa)
ADZ69197.1Dehydratase family; Belongs to the IlvD/Edd family. (599 aa)
ADZ69277.1Probable glutamate synthase small chain protein. (476 aa)
gltBGlutamate synthase [NADPH] large chain (Glutamate synthase alpha subunit) eukaryotic ferredoxin-dependent glutamate synthase 1 (GLU1)-like protein. (1582 aa)
ADZ69283.1Beta-eliminating lyase superfamily; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. (353 aa)
ADZ69514.1Glutamate dehydrogenase (NAD(P)(+)); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (372 aa)
ADZ69549.1Acetolactate synthase II; Belongs to the TPP enzyme family. (611 aa)
proCPyrroline-5-carboxylate reductase protein; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (272 aa)
ilvE-2Putative branched-chain amino acid transferase (IlvE-like); Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (299 aa)
aatAAminotransferase, classes I and II superfamily. (399 aa)
katGCatalase-peroxidase 1; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (723 aa)
ADZ69747.1Hydantoinase/oxoprolinase domain family protein. (1194 aa)
ADZ69813.1Putative phosphoserine phosphatase (SerB-like). (297 aa)
leuAPutative HMGL-like protein; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. (518 aa)
ilvCAcetohydroxy acid isomeroreductase-like protein; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (339 aa)
ilvHAcetolactate synthase, small subunit. (190 aa)
ADZ69833.1Putative acetolactate synthase large subunit-like protein. (591 aa)
ADZ69915.1Threonine dehydratase catabolic, TdcB. (327 aa)
hisIPhosphoribosyl-AMP cyclohydrolase domain protein; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. (153 aa)
dapA-2Dihydrodipicolinate synthase subfamily; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (292 aa)
ADZ70334.1Threonine dehydratase. (413 aa)
amiFFormamidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family. (339 aa)
aroQ3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. (146 aa)
glnA3Glutamine synthetase 1. (469 aa)
ADZ70485.1Regulatory protein, P-II 2, for nitrogen assimilation by glutamine synthetase, regulates GlnL (NRII) and GlnE (ATase). (112 aa)
trpCIndole-3-glycerol phosphate synthase protein; Belongs to the TrpC family. (276 aa)
trpDAnthranilate phosphoribosyltransferase 2; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (337 aa)
ADZ70697.1Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (451 aa)
ADZ70948.1Hypothetical protein. (92 aa)
ADZ70950.1Acetolactate synthase large subunit; Belongs to the TPP enzyme family. (596 aa)
ADZ70951.1Cupin 2 conserved barrel domain protein. (122 aa)
trpEAnthranilate synthase / glutamine amidotransferase protein. (728 aa)
ADZ71082.1Homoserine dehydrogenase. (433 aa)
ilvDDihydroxy-acid dehydratase 1; Belongs to the IlvD/Edd family. (614 aa)
leuA1Putative isopropylmalate synthase (LeuA-like); Belongs to the alpha-IPM synthase/homocitrate synthase family. (531 aa)
ADZ71173.13-deoxy-7-phosphoheptulonate synthase (Phospho-2-dehydro-3-deoxyheptonate aldolase) (DAHP synthetase class II). (460 aa)
ilvEBranched-chain amino acid aminotransferase 1. (326 aa)
ADZ71303.1Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. (434 aa)
ADZ71358.1Glutamate synthase, large subunit, putative; Belongs to the glutamate synthase family. (539 aa)
ADZ71401.1Aminotransferase, class IV superfamily. (285 aa)
ADZ71418.1Aminotransferase, classes I and II superfamily. (409 aa)
hisDHistidinol dehydrogenase 1; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. (431 aa)
dapBDihydrodipicolinate reductase (DapB); Belongs to the DapB family. (247 aa)
dapAStrongly dihydropicolinate synthase (DHDPS)-like protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (305 aa)
ilvBAcetolactate synthase, large subunit; Belongs to the TPP enzyme family. (544 aa)
ilvD-2Dihydroxy-acid dehydratase 2; Belongs to the IlvD/Edd family. (585 aa)
ADZ71590.1L-lactate dehydrogenase (Cytochrome). (384 aa)
aroEShikimate 5-dehydrogenase/quinate 5-dehydrogenase family protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (296 aa)
argFOrnithine carbamoyltransferase (OTCase); Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. (309 aa)
argDBifunctional N-succinyldiaminopimelate- aminotransferase/acetylornithine transaminase protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (400 aa)
aroCChorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (361 aa)
ADZ71740.1Oxidoreductase, FAD-binding protein. (470 aa)
thrCThreonine synthetase protein. (468 aa)
hisZATP phosphoribosyltransferase regulatory subunit. (383 aa)
hisGATP phosphoribosyltransferase family; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. (323 aa)
ADZ71912.1Putative glutamate--cysteine ligase protein; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily. (457 aa)
ilvGPutative acetohydroxyacid synthase large subunit-like protein; Belongs to the TPP enzyme family. (560 aa)
ADZ71935.1Threonine dehydratase, putative. (324 aa)
ADZ71945.1Glutamine synthetase, putative. (461 aa)
ADZ71947.1Glutamine synthetase, catalytic domain, putative. (464 aa)
ipuCGlutamine synthetase, catalytic domain, putative. (455 aa)
ADZ72008.1L-serine dehydratase protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. (462 aa)
ADZ72012.1Pyridoxal-dependent amino acid decarboxylase protein. (471 aa)
argBAcetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (295 aa)
dapD2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. (282 aa)
dapEAcetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-like deacylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. (393 aa)
ADZ72122.1Proline dehydrogenase family; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. (1042 aa)
leuD-23-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily. (170 aa)
ADZ72253.13-isopropylmalate dehydratase, large subunit; Belongs to the aconitase/IPM isomerase family. (438 aa)
ADZ72261.1Betaine-aldehyde dehydrogenase protein; Belongs to the aldehyde dehydrogenase family. (475 aa)
proBGlutamate 5-kinase 1; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. (378 aa)
proAGamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. (426 aa)
aroA3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (451 aa)
glnDUTP-GlnB uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism. (942 aa)
ADZ72711.1Prephenate dehydratase domain protein. (296 aa)
dapB-2Dihydrodipicolinate reductase protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (256 aa)
Your Current Organism:
Polymorphum gilvum
NCBI taxonomy Id: 991905
Other names: P. gilvum SL003B-26A1, Polymorphum gilvum SL003B-26A1, Polymorphum gilvum str. SL003B-26A1, Polymorphum gilvum strain SL003B-26A1, proteobacterium SL003B-26A1
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