Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADZ68598.1 | hemN | SL003B_0159 | SL003B_0025 | Putative methylase protein (RNA modification enzyme), MiaB family. | Coproporphyrinogen III oxidase, anaerobic; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.470 |
| ADZ68598.1 | nth | SL003B_0159 | SL003B_0059 | Putative methylase protein (RNA modification enzyme), MiaB family. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.458 |
| ADZ68598.1 | rlmN | SL003B_0159 | SL003B_0178 | Putative methylase protein (RNA modification enzyme), MiaB family. | Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.689 |
| ADZ68692.1 | ADZ70499.1 | SL003B_0255 | SL003B_2074 | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | NADH-quinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.623 |
| ADZ68692.1 | ADZ71771.1 | SL003B_0255 | SL003B_3349 | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Electrotransfer ubiquinone oxidoreductase protein; Accepts electrons from ETF and reduces ubiquinone. | 0.415 |
| ADZ68692.1 | fdsB | SL003B_0255 | SL003B_2128 | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | NADH dehydrogenase (Quinone). | 0.565 |
| ADZ68692.1 | fumB | SL003B_0255 | SL003B_2806 | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Fumarate hydratase I, N-terminal region or alpha subunit domain protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.791 |
| ADZ68692.1 | nuoF | SL003B_0255 | SL003B_2073 | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Nadh dehydrogenase i chain f transmembrane protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.565 |
| ADZ68692.1 | nuoI1 | SL003B_0255 | SL003B_2077 | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.482 |
| ADZ68692.1 | sdhB | SL003B_0255 | SL003B_0184 | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.894 |
| ADZ68987.1 | ADZ68988.1 | SL003B_0554 | SL003B_0555 | Peptidase U32. | Peptidase U32. | 0.992 |
| ADZ68988.1 | ADZ68987.1 | SL003B_0555 | SL003B_0554 | Peptidase U32. | Peptidase U32. | 0.992 |
| ADZ68988.1 | hemN-2 | SL003B_0555 | SL003B_3215 | Peptidase U32. | Oxygen-independent coproporphyrinogen III oxidase (Coproporphyrinogenase) (Coprogen oxidase); Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.493 |
| ADZ69258.1 | ADZ69708.1 | SL003B_0828 | SL003B_1279 | Putative Indolepyruvate ferredoxin oxidoreductase; iorA-like protein. | Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.405 |
| ADZ69258.1 | ADZ70022.1 | SL003B_0828 | SL003B_1594 | Putative Indolepyruvate ferredoxin oxidoreductase; iorA-like protein. | 2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit domain protein. | 0.940 |
| ADZ69258.1 | ADZ70499.1 | SL003B_0828 | SL003B_2074 | Putative Indolepyruvate ferredoxin oxidoreductase; iorA-like protein. | NADH-quinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.501 |
| ADZ69258.1 | ADZ70810.1 | SL003B_0828 | SL003B_2385 | Putative Indolepyruvate ferredoxin oxidoreductase; iorA-like protein. | Molybdopterin oxidoreductase domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.405 |
| ADZ69258.1 | ADZ70960.1 | SL003B_0828 | SL003B_2536 | Putative Indolepyruvate ferredoxin oxidoreductase; iorA-like protein. | Citrate utilization protein B. | 0.532 |
| ADZ69258.1 | fdnG | SL003B_0828 | SL003B_1278 | Putative Indolepyruvate ferredoxin oxidoreductase; iorA-like protein. | Formate dehydrogenase, major subunit. | 0.405 |
| ADZ69258.1 | fdsA | SL003B_0828 | SL003B_2129 | Putative Indolepyruvate ferredoxin oxidoreductase; iorA-like protein. | Formate dehydrogenase, alpha subunit protein. | 0.510 |
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