(70 nodes) ABC transporter type 1, transmembrane domain MetI-like network (Polymorphum gilvum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ugpE	Putative sugar ABC transporter (Permease protein); Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (282 aa)
	ADZ68982.1	AttA2-like ABC transporter, permease protein. (273 aa)
	ADZ68983.1	ABC transporter permease protein. (267 aa)
	ADZ69167.1	ABC transporter, permease protein, putative. (273 aa)
	ADZ69168.1	ABC transporter, permease protein, putative. (296 aa)
	ADZ69201.1	ABC transporter, permease protein. (320 aa)
	ADZ69202.1	ABC transporter permease protein. (324 aa)
	ADZ69223.1	Probable nitrate/sulfonate/bicarbonate ABC transporter, permease protein. (290 aa)
	ADZ69365.1	ABC transporter, permease protein, putative. (247 aa)
	ADZ69390.1	Dipeptide transport system permease protein dppB. (365 aa)
	dppC	Probable dipeptide transport system permease protein. (309 aa)
	ADZ69399.1	Iron(III) ABC transporter, permease protein. (569 aa)
	ADZ69404.1	ABC transporter, permease protein. (294 aa)
	ssuC	Aliphatic sulfonates transport permease protein, putative. (255 aa)
	ADZ69542.1	ABC transporter, permease protein. (258 aa)
	ADZ69541.1	ABC transporter, permease component. (284 aa)
	ADZ69836.1	Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (258 aa)
	ADZ69837.1	Sulfate ABC transporter, permease protein CysW. (281 aa)
	ADZ69846.1	Probable aliphatic sulfonate ABC transporter, permease protein. (277 aa)
	ADZ70301.1	Phosphonate ABC transporter, ATPase subunit. (268 aa)
	ADZ70302.1	Phosphonate ABC transporter, permease protein, putative. (275 aa)
	ADZ70306.1	Phosphonate ABC transporter, permease protein, putative. (282 aa)
	phnE	Phosphonate ABC transporter, permease protein. (451 aa)
	ADZ70432.1	ABC transporter, permease protein, putative. (395 aa)
	ADZ70433.1	ABC transporter, permease protein. (385 aa)
	ADZ70452.1	Putative nitrate transport system permease protein. (577 aa)
	ADZ70565.1	ATP-binding cassette (ABC) superfamily transporter, permease component. (276 aa)
	ADZ70602.1	Putative transport system permease abc transporter protein. (304 aa)
	gsiC	Hypothetical ABC transporter permease protein. (308 aa)
	ADZ70720.1	ABC transporter, permease protein. (306 aa)
	ADZ70721.1	Probable nitrate/sulfonate ABC transporter, permease protein. (378 aa)
	ADZ70847.1	Putative sugar ABC transporter permease protein. (276 aa)
	ADZ70848.1	Putative ABC transporter permease protein. (311 aa)
	ADZ70869.1	Peptide ABC transporter, permease protein, putative. (304 aa)
	ADZ70870.1	Peptide ABC transporter, permease protein, putative. (327 aa)
	ADZ70996.1	Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (222 aa)
	ADZ71066.1	ABC transporter, permease protein, putative. (284 aa)
	ADZ71065.1	ABC transporter, permease protein. (418 aa)
	ADZ71202.1	Oligopeptide transporter, permease protein. (312 aa)
	ADZ71203.1	ABC transporter, permease protein. (289 aa)
	ADZ71242.1	ABC transporter, permease protein, putative. (237 aa)
	ADZ71243.1	ABC transporter, permease protein, putative. (272 aa)
	ADZ71257.1	Phosphonate ABC transporter, permease protein. (266 aa)
	ADZ71306.1	Permease protein of oligopeptide ABC transporter. (316 aa)
	ADZ71307.1	Permease protein of oligopeptide ABC transporter. (279 aa)
	ADZ71310.1	Probable oligopeptide ABC transporter, permease protein. (388 aa)
	ADZ71311.1	ABC transporter, permease protein. (341 aa)
	ADZ71509.1	ABC transporter, permease protein. (260 aa)
	ADZ71508.1	ABC transporter, permease protein. (290 aa)
	ADZ71515.1	ABC transporter, permease protein, putative. (255 aa)
	potC	ABC transporter, membrane spanning protein (Spermidine/putrescine). (268 aa)
	potB	ABC transporter, membrane spanning protein (Spermidine/putrescine). (300 aa)
	ADZ71580.1	ABC transporter permease protein. (221 aa)
	ADZ71614.1	ABC transporter permease protein. (281 aa)
	ADZ71615.1	ABC transporter permease protein. (273 aa)
	ADZ71700.1	Phosphate ABC transporter, permease protein PstA. (432 aa)
	ADZ71701.1	Phosphate ABC transporter permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (457 aa)
	ADZ71937.1	Iron(III) ABC transporter permease protein. (562 aa)
	ADZ71941.1	ABC transporter, permease protein, putative. (273 aa)
	ADZ71942.1	ABC transporter, permease protein, putative. (308 aa)
	ADZ71989.1	Glycine betaine/l-proline transport system permease protein prow. (282 aa)
	ADZ72125.1	ABC-type spermidine/putrescine transport system permease component II-like protein. (552 aa)
	dppB5	ABC transporter, permease protein, putative. (335 aa)
	dppC5	ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (302 aa)
	ADZ72262.1	Probable spermidine/putrescine ABC transporter, permease protein. (273 aa)
	ADZ72263.1	ABC transporter permease protein. (316 aa)
	ADZ72555.1	Binding-protein-dependent transport systems inner membrane component. (521 aa)
	ADZ72597.1	Sn-glycerol-3-phosphate ABC transporter, permease protein. (294 aa)
	ADZ72703.1	ABC transporter, permease protein. (395 aa)
	ADZ72704.1	ABC transporter, permease protein. (369 aa)

Your Current Organism:

Polymorphum gilvum

NCBI taxonomy Id: 991905
Other names: P. gilvum SL003B-26A1, Polymorphum gilvum SL003B-26A1, Polymorphum gilvum str. SL003B-26A1, Polymorphum gilvum strain SL003B-26A1, proteobacterium SL003B-26A1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADZ68982.1	ADZ68983.1	SL003B_0549	SL003B_0550	AttA2-like ABC transporter, permease protein.	ABC transporter permease protein.	0.976
ADZ68982.1	ADZ71066.1	SL003B_0549	SL003B_2642	AttA2-like ABC transporter, permease protein.	ABC transporter, permease protein, putative.	0.975
ADZ68982.1	ADZ71509.1	SL003B_0549	SL003B_3085	AttA2-like ABC transporter, permease protein.	ABC transporter, permease protein.	0.596
ADZ68982.1	ADZ71614.1	SL003B_0549	SL003B_3192	AttA2-like ABC transporter, permease protein.	ABC transporter permease protein.	0.784
ADZ68982.1	ADZ71941.1	SL003B_0549	SL003B_3519	AttA2-like ABC transporter, permease protein.	ABC transporter, permease protein, putative.	0.806
ADZ68982.1	ADZ72262.1	SL003B_0549	SL003B_3842	AttA2-like ABC transporter, permease protein.	Probable spermidine/putrescine ABC transporter, permease protein.	0.892
ADZ68982.1	potC	SL003B_0549	SL003B_3111	AttA2-like ABC transporter, permease protein.	ABC transporter, membrane spanning protein (Spermidine/putrescine).	0.903
ADZ68983.1	ADZ68982.1	SL003B_0550	SL003B_0549	ABC transporter permease protein.	AttA2-like ABC transporter, permease protein.	0.976
ADZ68983.1	ADZ71065.1	SL003B_0550	SL003B_2643	ABC transporter permease protein.	ABC transporter, permease protein.	0.939
ADZ68983.1	ADZ71508.1	SL003B_0550	SL003B_3086	ABC transporter permease protein.	ABC transporter, permease protein.	0.571
ADZ68983.1	ADZ71615.1	SL003B_0550	SL003B_3193	ABC transporter permease protein.	ABC transporter permease protein.	0.674
ADZ68983.1	ADZ71942.1	SL003B_0550	SL003B_3520	ABC transporter permease protein.	ABC transporter, permease protein, putative.	0.940
ADZ68983.1	ADZ72263.1	SL003B_0550	SL003B_3843	ABC transporter permease protein.	ABC transporter permease protein.	0.876
ADZ68983.1	potB	SL003B_0550	SL003B_3112	ABC transporter permease protein.	ABC transporter, membrane spanning protein (Spermidine/putrescine).	0.904
ADZ69167.1	ADZ69168.1	SL003B_0737	SL003B_0738	ABC transporter, permease protein, putative.	ABC transporter, permease protein, putative.	0.998
ADZ69167.1	ADZ70847.1	SL003B_0737	SL003B_2422	ABC transporter, permease protein, putative.	Putative sugar ABC transporter permease protein.	0.917
ADZ69167.1	ADZ70848.1	SL003B_0737	SL003B_2423	ABC transporter, permease protein, putative.	Putative ABC transporter permease protein.	0.967
ADZ69167.1	ADZ72597.1	SL003B_0737	SL003B_4180	ABC transporter, permease protein, putative.	Sn-glycerol-3-phosphate ABC transporter, permease protein.	0.992
ADZ69167.1	ugpE	SL003B_0737	SL003B_4179	ABC transporter, permease protein, putative.	Putative sugar ABC transporter (Permease protein); Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.	0.922
ADZ69168.1	ADZ69167.1	SL003B_0738	SL003B_0737	ABC transporter, permease protein, putative.	ABC transporter, permease protein, putative.	0.998

page 1 of 18

Server load: low (10%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About