(15 nodes) Prefrontal cortex network (Capra hircus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACTL8	Actin like 8; Belongs to the actin family. (389 aa)
	SV2A	Synaptic vesicle glycoprotein 2A. (742 aa)
	SV2C	Synaptic vesicle glycoprotein 2C. (725 aa)
	RAB12	RAB12, member RAS oncogene family. (244 aa)
	LOC102180084	Uncharacterized protein; Belongs to the actin family. (319 aa)
	ACTB	Uncharacterized protein. (375 aa)
	LOC102176799	Glyceraldehyde-3-phosphate dehydrogenase. (333 aa)
	ACTBL2	Actin beta like 2. (376 aa)
	MAP2	Microtubule-associated protein. (1868 aa)
	MBP	Uncharacterized protein. (191 aa)
	SV2B	Synaptic vesicle glycoprotein 2B. (683 aa)
	ACTG1	Actin gamma 1. (376 aa)
	APP	Amyloid beta precursor protein. (770 aa)
	PLP1	Proteolipid protein 1. (277 aa)
	GAPDH	Glyceraldehyde-3-phosphate dehydrogenase. (333 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTB	ACTG1	ENSCHIP00000011080	ENSCHIP00000032903	Uncharacterized protein.	Actin gamma 1.	0.487
ACTB	APP	ENSCHIP00000011080	ENSCHIP00000032622	Uncharacterized protein.	Amyloid beta precursor protein.	0.778
ACTB	GAPDH	ENSCHIP00000011080	ENSCHIP00000025974	Uncharacterized protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.979
ACTB	LOC102176799	ENSCHIP00000011080	ENSCHIP00000004827	Uncharacterized protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.937
ACTB	MAP2	ENSCHIP00000011080	ENSCHIP00000000751	Uncharacterized protein.	Microtubule-associated protein.	0.724
ACTB	MBP	ENSCHIP00000011080	ENSCHIP00000000512	Uncharacterized protein.	Uncharacterized protein.	0.757
ACTB	PLP1	ENSCHIP00000011080	ENSCHIP00000030903	Uncharacterized protein.	Proteolipid protein 1.	0.432
ACTBL2	GAPDH	ENSCHIP00000002870	ENSCHIP00000025974	Actin beta like 2.	Glyceraldehyde-3-phosphate dehydrogenase.	0.402
ACTG1	ACTB	ENSCHIP00000032903	ENSCHIP00000011080	Actin gamma 1.	Uncharacterized protein.	0.487
ACTG1	APP	ENSCHIP00000032903	ENSCHIP00000032622	Actin gamma 1.	Amyloid beta precursor protein.	0.493
ACTG1	GAPDH	ENSCHIP00000032903	ENSCHIP00000025974	Actin gamma 1.	Glyceraldehyde-3-phosphate dehydrogenase.	0.685
ACTG1	LOC102176799	ENSCHIP00000032903	ENSCHIP00000004827	Actin gamma 1.	Glyceraldehyde-3-phosphate dehydrogenase.	0.580
APP	ACTB	ENSCHIP00000032622	ENSCHIP00000011080	Amyloid beta precursor protein.	Uncharacterized protein.	0.778
APP	ACTG1	ENSCHIP00000032622	ENSCHIP00000032903	Amyloid beta precursor protein.	Actin gamma 1.	0.493
APP	GAPDH	ENSCHIP00000032622	ENSCHIP00000025974	Amyloid beta precursor protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.961
APP	MAP2	ENSCHIP00000032622	ENSCHIP00000000751	Amyloid beta precursor protein.	Microtubule-associated protein.	0.669
APP	MBP	ENSCHIP00000032622	ENSCHIP00000000512	Amyloid beta precursor protein.	Uncharacterized protein.	0.431
APP	PLP1	ENSCHIP00000032622	ENSCHIP00000030903	Amyloid beta precursor protein.	Proteolipid protein 1.	0.430
GAPDH	ACTB	ENSCHIP00000025974	ENSCHIP00000011080	Glyceraldehyde-3-phosphate dehydrogenase.	Uncharacterized protein.	0.979
GAPDH	ACTBL2	ENSCHIP00000025974	ENSCHIP00000002870	Glyceraldehyde-3-phosphate dehydrogenase.	Actin beta like 2.	0.402