11 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HOXA9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (279 aa)
	HOXC5	Homeobox C5. (222 aa)
	HOXC6	Homeobox C6. (235 aa)
	MEIS2	Meis homeobox 2. (470 aa)
	HOXA10	Homeobox A10. (413 aa)
	HOXC9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (260 aa)
	PBX1	PBX homeobox 1. (325 aa)
	PBX3	PBX homeobox 3. (434 aa)
	HOXA7	Homeobox A7. (239 aa)
	HOXC4	Homeobox C4. (264 aa)
	MEIS1	Meis homeobox 1. (465 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HOXA10	HOXA7	ENSCHIP00000013381	ENSCHIP00000024972	Homeobox A10.	Homeobox A7.	0.710
HOXA10	HOXA9	ENSCHIP00000013381	ENSCHIP00000002117	Homeobox A10.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.861
HOXA10	MEIS1	ENSCHIP00000013381	ENSCHIP00000033811	Homeobox A10.	Meis homeobox 1.	0.788
HOXA10	MEIS2	ENSCHIP00000013381	ENSCHIP00000011965	Homeobox A10.	Meis homeobox 2.	0.411
HOXA10	PBX1	ENSCHIP00000013381	ENSCHIP00000021441	Homeobox A10.	PBX homeobox 1.	0.608
HOXA10	PBX3	ENSCHIP00000013381	ENSCHIP00000021502	Homeobox A10.	PBX homeobox 3.	0.539
HOXA7	HOXA10	ENSCHIP00000024972	ENSCHIP00000013381	Homeobox A7.	Homeobox A10.	0.710
HOXA7	HOXA9	ENSCHIP00000024972	ENSCHIP00000002117	Homeobox A7.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.842
HOXA7	HOXC4	ENSCHIP00000024972	ENSCHIP00000031829	Homeobox A7.	Homeobox C4.	0.680
HOXA7	HOXC5	ENSCHIP00000024972	ENSCHIP00000002716	Homeobox A7.	Homeobox C5.	0.578
HOXA7	HOXC6	ENSCHIP00000024972	ENSCHIP00000010931	Homeobox A7.	Homeobox C6.	0.676
HOXA7	HOXC9	ENSCHIP00000024972	ENSCHIP00000015187	Homeobox A7.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.494
HOXA7	MEIS1	ENSCHIP00000024972	ENSCHIP00000033811	Homeobox A7.	Meis homeobox 1.	0.737
HOXA7	MEIS2	ENSCHIP00000024972	ENSCHIP00000011965	Homeobox A7.	Meis homeobox 2.	0.467
HOXA7	PBX1	ENSCHIP00000024972	ENSCHIP00000021441	Homeobox A7.	PBX homeobox 1.	0.533
HOXA7	PBX3	ENSCHIP00000024972	ENSCHIP00000021502	Homeobox A7.	PBX homeobox 3.	0.636
HOXA9	HOXA10	ENSCHIP00000002117	ENSCHIP00000013381	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox A10.	0.861
HOXA9	HOXA7	ENSCHIP00000002117	ENSCHIP00000024972	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox A7.	0.842
HOXA9	HOXC4	ENSCHIP00000002117	ENSCHIP00000031829	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox C4.	0.443
HOXA9	MEIS1	ENSCHIP00000002117	ENSCHIP00000033811	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Meis homeobox 1.	0.916