19 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SLC35E1	Solute carrier family 35 member E1. (412 aa)
	SLC35D3	Solute carrier family 35 member D3. (423 aa)
	SLC35C2	Solute carrier family 35 member C2. (365 aa)
	SLC35A3	Solute carrier family 35 member A3. (326 aa)
	SLC35G1	Solute carrier family 35 member G1. (365 aa)
	B4GALNT3	Beta-1,4-N-acetylgalactosaminyltransferase; Transfers N-acetylgalactosamine (GalNAc) from UDP-GalNAc to N-acetylglucosamine-beta-benzyl with a beta-1,4-linkage to form N,N'- diacetyllactosediamine, GalNAc-beta-1,4-GlcNAc structures in N-linked glycans and probably O-linked glycans. (1003 aa)
	SLC35B4	Solute carrier family 35 member B4. (331 aa)
	TPST2	Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family. (387 aa)
	SLC35B2	Solute carrier family 35 member B2. (437 aa)
	SLC35A1	Solute carrier family 35 member A1. (337 aa)
	SLC35B3	Solute carrier family 35 member B3. (428 aa)
	CHST8	Carbohydrate sulfotransferase. (424 aa)
	SLC35D2	TPT domain-containing protein. (354 aa)
	SLC35C1	Solute carrier family 35 member C1. (372 aa)
	CHST9	Carbohydrate sulfotransferase. (442 aa)
	LOC102176955	Uncharacterized protein. (353 aa)
	SLC35F2	Solute carrier family 35 member F2. (370 aa)
	ZNF471	Zinc finger protein 471. (759 aa)
	SLC35D1	Solute carrier family 35 member D1. (355 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B4GALNT3	CHST8	ENSCHIP00000016578	ENSCHIP00000021166	Beta-1,4-N-acetylgalactosaminyltransferase; Transfers N-acetylgalactosamine (GalNAc) from UDP-GalNAc to N-acetylglucosamine-beta-benzyl with a beta-1,4-linkage to form N,N'- diacetyllactosediamine, GalNAc-beta-1,4-GlcNAc structures in N-linked glycans and probably O-linked glycans.	Carbohydrate sulfotransferase.	0.908
B4GALNT3	CHST9	ENSCHIP00000016578	ENSCHIP00000024533	Beta-1,4-N-acetylgalactosaminyltransferase; Transfers N-acetylgalactosamine (GalNAc) from UDP-GalNAc to N-acetylglucosamine-beta-benzyl with a beta-1,4-linkage to form N,N'- diacetyllactosediamine, GalNAc-beta-1,4-GlcNAc structures in N-linked glycans and probably O-linked glycans.	Carbohydrate sulfotransferase.	0.908
CHST8	B4GALNT3	ENSCHIP00000021166	ENSCHIP00000016578	Carbohydrate sulfotransferase.	Beta-1,4-N-acetylgalactosaminyltransferase; Transfers N-acetylgalactosamine (GalNAc) from UDP-GalNAc to N-acetylglucosamine-beta-benzyl with a beta-1,4-linkage to form N,N'- diacetyllactosediamine, GalNAc-beta-1,4-GlcNAc structures in N-linked glycans and probably O-linked glycans.	0.908
CHST8	CHST9	ENSCHIP00000021166	ENSCHIP00000024533	Carbohydrate sulfotransferase.	Carbohydrate sulfotransferase.	0.905
CHST8	SLC35B2	ENSCHIP00000021166	ENSCHIP00000018750	Carbohydrate sulfotransferase.	Solute carrier family 35 member B2.	0.643
CHST8	SLC35G1	ENSCHIP00000021166	ENSCHIP00000015749	Carbohydrate sulfotransferase.	Solute carrier family 35 member G1.	0.451
CHST8	TPST2	ENSCHIP00000021166	ENSCHIP00000018460	Carbohydrate sulfotransferase.	Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family.	0.725
CHST9	B4GALNT3	ENSCHIP00000024533	ENSCHIP00000016578	Carbohydrate sulfotransferase.	Beta-1,4-N-acetylgalactosaminyltransferase; Transfers N-acetylgalactosamine (GalNAc) from UDP-GalNAc to N-acetylglucosamine-beta-benzyl with a beta-1,4-linkage to form N,N'- diacetyllactosediamine, GalNAc-beta-1,4-GlcNAc structures in N-linked glycans and probably O-linked glycans.	0.908
CHST9	CHST8	ENSCHIP00000024533	ENSCHIP00000021166	Carbohydrate sulfotransferase.	Carbohydrate sulfotransferase.	0.905
CHST9	SLC35B2	ENSCHIP00000024533	ENSCHIP00000018750	Carbohydrate sulfotransferase.	Solute carrier family 35 member B2.	0.536
CHST9	TPST2	ENSCHIP00000024533	ENSCHIP00000018460	Carbohydrate sulfotransferase.	Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family.	0.599
LOC102176955	SLC35A3	ENSCHIP00000028338	ENSCHIP00000011429	Uncharacterized protein.	Solute carrier family 35 member A3.	0.610
LOC102176955	SLC35B3	ENSCHIP00000028338	ENSCHIP00000018920	Uncharacterized protein.	Solute carrier family 35 member B3.	0.477
LOC102176955	SLC35B4	ENSCHIP00000028338	ENSCHIP00000017194	Uncharacterized protein.	Solute carrier family 35 member B4.	0.729
LOC102176955	SLC35D2	ENSCHIP00000028338	ENSCHIP00000022436	Uncharacterized protein.	TPT domain-containing protein.	0.609
SLC35A1	SLC35B2	ENSCHIP00000018775	ENSCHIP00000018750	Solute carrier family 35 member A1.	Solute carrier family 35 member B2.	0.783
SLC35A1	SLC35B3	ENSCHIP00000018775	ENSCHIP00000018920	Solute carrier family 35 member A1.	Solute carrier family 35 member B3.	0.705
SLC35A1	SLC35B4	ENSCHIP00000018775	ENSCHIP00000017194	Solute carrier family 35 member A1.	Solute carrier family 35 member B4.	0.566
SLC35A1	SLC35C1	ENSCHIP00000018775	ENSCHIP00000023733	Solute carrier family 35 member A1.	Solute carrier family 35 member C1.	0.796
SLC35A1	SLC35C2	ENSCHIP00000018775	ENSCHIP00000010989	Solute carrier family 35 member A1.	Solute carrier family 35 member C2.	0.578