(5 nodes) Protein insertion into ER membrane by stop-transfer membrane-anchor sequence network (Capra hircus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EMC6	ER membrane protein complex subunit 6. (110 aa)
	EMC4	ER membrane protein complex subunit 4; Belongs to the EMC4 family. (183 aa)
	EMC2	ER membrane protein complex subunit 2. (329 aa)
	EMC8	ER membrane protein complex subunit 8. (210 aa)
	EMC1	ER membrane protein complex subunit 1. (1035 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EMC1	EMC2	ENSCHIP00000032055	ENSCHIP00000023012	ER membrane protein complex subunit 1.	ER membrane protein complex subunit 2.	0.996
EMC1	EMC4	ENSCHIP00000032055	ENSCHIP00000022325	ER membrane protein complex subunit 1.	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	0.997
EMC1	EMC6	ENSCHIP00000032055	ENSCHIP00000004113	ER membrane protein complex subunit 1.	ER membrane protein complex subunit 6.	0.996
EMC1	EMC8	ENSCHIP00000032055	ENSCHIP00000023028	ER membrane protein complex subunit 1.	ER membrane protein complex subunit 8.	0.984
EMC2	EMC1	ENSCHIP00000023012	ENSCHIP00000032055	ER membrane protein complex subunit 2.	ER membrane protein complex subunit 1.	0.996
EMC2	EMC4	ENSCHIP00000023012	ENSCHIP00000022325	ER membrane protein complex subunit 2.	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	0.999
EMC2	EMC6	ENSCHIP00000023012	ENSCHIP00000004113	ER membrane protein complex subunit 2.	ER membrane protein complex subunit 6.	0.996
EMC2	EMC8	ENSCHIP00000023012	ENSCHIP00000023028	ER membrane protein complex subunit 2.	ER membrane protein complex subunit 8.	0.996
EMC4	EMC1	ENSCHIP00000022325	ENSCHIP00000032055	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	ER membrane protein complex subunit 1.	0.997
EMC4	EMC2	ENSCHIP00000022325	ENSCHIP00000023012	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	ER membrane protein complex subunit 2.	0.999
EMC4	EMC6	ENSCHIP00000022325	ENSCHIP00000004113	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	ER membrane protein complex subunit 6.	0.997
EMC4	EMC8	ENSCHIP00000022325	ENSCHIP00000023028	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	ER membrane protein complex subunit 8.	0.990
EMC6	EMC1	ENSCHIP00000004113	ENSCHIP00000032055	ER membrane protein complex subunit 6.	ER membrane protein complex subunit 1.	0.996
EMC6	EMC2	ENSCHIP00000004113	ENSCHIP00000023012	ER membrane protein complex subunit 6.	ER membrane protein complex subunit 2.	0.996
EMC6	EMC4	ENSCHIP00000004113	ENSCHIP00000022325	ER membrane protein complex subunit 6.	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	0.997
EMC6	EMC8	ENSCHIP00000004113	ENSCHIP00000023028	ER membrane protein complex subunit 6.	ER membrane protein complex subunit 8.	0.987
EMC8	EMC1	ENSCHIP00000023028	ENSCHIP00000032055	ER membrane protein complex subunit 8.	ER membrane protein complex subunit 1.	0.984
EMC8	EMC2	ENSCHIP00000023028	ENSCHIP00000023012	ER membrane protein complex subunit 8.	ER membrane protein complex subunit 2.	0.996
EMC8	EMC4	ENSCHIP00000023028	ENSCHIP00000022325	ER membrane protein complex subunit 8.	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	0.990
EMC8	EMC6	ENSCHIP00000023028	ENSCHIP00000004113	ER membrane protein complex subunit 8.	ER membrane protein complex subunit 6.	0.987