STRINGSTRING
LSM2 LSM2 SART3 SART3 AAR2 AAR2 PRPF31 PRPF31 PRPF19 PRPF19 PRPF6 PRPF6 USP4 USP4 PRPF8 PRPF8 PRPF3 PRPF3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (94 aa)
SART3Spliceosome associated factor 3, U4/U6 recycling protein. (981 aa)
AAR2AAR2 splicing factor. (384 aa)
PRPF31Pre-mRNA processing factor 31. (499 aa)
PRPF19Pre-mRNA processing factor 19. (504 aa)
PRPF6Pre-mRNA processing factor 6. (948 aa)
USP4Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (963 aa)
PRPF8Pre-mRNA processing factor 8. (2335 aa)
PRPF3Pre-mRNA processing factor 3. (683 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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