STRINGSTRING
RAD52 RAD52 MORF4L1 MORF4L1 WDR48 WDR48 RECQL5 RECQL5 PALB2 PALB2 SMC6 SMC6 SWSAP1 SWSAP1 INO80 INO80 BLM BLM CCDC155 CCDC155 SAMHD1 SAMHD1 RAD21 RAD21 RECQL4 RECQL4 NBN NBN NIPBL NIPBL MCM5 MCM5 AP5S1 AP5S1 RMI1 RMI1 RBBP8 RBBP8 MEIOB MEIOB YY1 YY1 GEN1 GEN1 RAD51AP1 RAD51AP1 RFWD3 RFWD3 ATM ATM SLX4 SLX4 MCM6 MCM6 SMC5 SMC5 MCM4 MCM4 SPIDR SPIDR MCM9 MCM9 SWI5 SWI5 XRCC2 XRCC2 HUS1 HUS1 TOP3A TOP3A MCM8 MCM8 RAD51B RAD51B AUNIP AUNIP WRN WRN CDC45 CDC45 FANCM FANCM FANCB FANCB KAT5 KAT5 BRCA1 BRCA1 RAD51 RAD51 AP5Z1 AP5Z1 CDC7 CDC7 NABP2 NABP2 RAD51C RAD51C NUCKS1 NUCKS1 TONSL TONSL INIP INIP FBH1 FBH1 GINS4 GINS4 TM4SF19 TM4SF19 GINS2 GINS2 POLL POLL NSMCE2 NSMCE2 MCM7 MCM7 EPC1 EPC1 ENSCHIP00000002654 ENSCHIP00000002654 LOC106502849 LOC106502849 MUS81 MUS81 RPA3 RPA3 ENSCHIP00000027563 ENSCHIP00000027563 SFPQ SFPQ REV3L REV3L MCMDC2 MCMDC2 ERCC4 ERCC4 PPP4C PPP4C RECQL RECQL DMC1 DMC1 RAD21L1 RAD21L1 MRE11 MRE11 RMI2 RMI2 BRCA2 BRCA2 FAN1 FAN1 NABP1 NABP1 ENSCHIP00000031435 ENSCHIP00000031435 INTS3 INTS3 ENSCHIP00000031621 ENSCHIP00000031621 SLX1A SLX1A XRCC3 XRCC3 ZFYVE26 ZFYVE26 MBTD1 MBTD1 PSMD14 PSMD14 RPA1 RPA1 XRCC1 XRCC1 SEM1 SEM1 MCM3 MCM3 SFR1 SFR1 HELQ HELQ REC8 REC8 RAD54L RAD54L NSMCE1 NSMCE1 RPA2 RPA2 ANKLE1 ANKLE1 MMS22L MMS22L RAD51D RAD51D MCM2 MCM2 ENSCHIP00000003676 ENSCHIP00000003676 FSBP FSBP ZSWIM7 ZSWIM7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RAD52RAD52 homolog, DNA repair protein. (416 aa)
MORF4L1Mortality factor 4 like 1. (363 aa)
WDR48WD repeat domain 48. (678 aa)
RECQL5ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (991 aa)
PALB2Partner and localizer of BRCA2. (1194 aa)
SMC6Structural maintenance of chromosomes 6. (1116 aa)
SWSAP1SWIM-type zinc finger 7 associated protein 1. (250 aa)
INO80INO80 complex ATPase subunit. (1566 aa)
BLMBLM RecQ like helicase. (1429 aa)
CCDC155Coiled-coil domain containing 155. (505 aa)
SAMHD1SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1. (606 aa)
RAD21RAD21 cohesin complex component. (630 aa)
RECQL4RecQ like helicase 4. (1176 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (754 aa)
NIPBLNipped-B protein. (2804 aa)
MCM5DNA helicase; Belongs to the MCM family. (734 aa)
AP5S1Adaptor related protein complex 5 subunit sigma 1. (200 aa)
RMI1RecQ mediated genome instability 1. (624 aa)
RBBP8RB binding protein 8, endonuclease. (889 aa)
MEIOBMeiosis specific with OB-fold. (467 aa)
YY1YY1 transcription factor. (415 aa)
GEN1GEN1 Holliday junction 5' flap endonuclease. (931 aa)
RAD51AP1RAD51 associated protein 1. (326 aa)
RFWD3Ring finger and WD repeat domain 3. (791 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3058 aa)
SLX4SLX4 structure-specific endonuclease subunit. (1752 aa)
MCM6DNA helicase; Belongs to the MCM family. (821 aa)
SMC5AAA_23 domain-containing protein. (1104 aa)
MCM4DNA helicase; Belongs to the MCM family. (851 aa)
SPIDRScaffold protein involved in DNA repair. (916 aa)
MCM9Minichromosome maintenance 9 homologous recombination repair factor; Belongs to the MCM family. (1137 aa)
SWI5SWI5 homologous recombination repair protein. (223 aa)
XRCC2X-ray repair cross complementing 2. (280 aa)
HUS1Checkpoint protein; Belongs to the HUS1 family. (280 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1002 aa)
MCM8MCM domain-containing protein; Belongs to the MCM family. (832 aa)
RAD51BRAD51 paralog B. (270 aa)
AUNIPAurora kinase A and ninein interacting protein. (357 aa)
WRNWRN RecQ like helicase. (1405 aa)
CDC45Cell division cycle 45. (524 aa)
FANCMFA complementation group M. (2043 aa)
FANCBUncharacterized protein. (447 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (546 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1843 aa)
RAD51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
AP5Z1Adaptor related protein complex 5 subunit zeta 1. (807 aa)
CDC7Cell division cycle 7. (576 aa)
NABP2Nucleic acid binding protein 2. (175 aa)
RAD51CRAD51 paralog C. (371 aa)
NUCKS1Uncharacterized protein. (248 aa)
TONSLTonsoku like, DNA repair protein. (1371 aa)
INIPINTS3 and NABP interacting protein. (102 aa)
FBH1F-box DNA helicase 1. (1048 aa)
GINS4DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (223 aa)
TM4SF19Uncharacterized protein. (202 aa)
GINS2DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (185 aa)
POLLDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (594 aa)
NSMCE2NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase. (277 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (719 aa)
EPC1Enhancer of polycomb homolog. (842 aa)
ENSCHIP00000002654Uncharacterized protein. (121 aa)
LOC106502849Uncharacterized protein. (242 aa)
MUS81MUS81 structure-specific endonuclease subunit. (552 aa)
RPA3Uncharacterized protein. (121 aa)
ENSCHIP00000027563MPN domain-containing protein. (302 aa)
SFPQSplicing factor proline and glutamine rich. (711 aa)
REV3LREV3 like, DNA directed polymerase zeta catalytic subunit. (3134 aa)
MCMDC2Minichromosome maintenance domain containing 2. (681 aa)
ERCC4ERCC excision repair 4, endonuclease catalytic subunit. (916 aa)
PPP4CSerine/threonine-protein phosphatase. (307 aa)
RECQLATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (649 aa)
DMC1Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily. (340 aa)
RAD21L1RAD21 cohesin complex component like 1. (554 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (724 aa)
RMI2Uncharacterized protein. (161 aa)
BRCA2BRCA2 DNA repair associated. (3405 aa)
FAN1Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (1022 aa)
NABP1Nucleic acid binding protein 1. (205 aa)
ENSCHIP00000031435Uncharacterized protein. (77 aa)
INTS3Integrator complex subunit 3. (1041 aa)
ENSCHIP00000031621Uncharacterized protein. (159 aa)
SLX1AStructure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. Has a preference for 5'-flap structures, and promotes symmetrical cleavage of static and migrating Holliday junctions (HJs). Resolves HJs by generating two pairs of ligatable, nicked duplex products. (267 aa)
XRCC3DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. (341 aa)
ZFYVE26Zinc finger FYVE-type containing 26. (2534 aa)
MBTD1Mbt domain containing 1. (628 aa)
PSMD14MPN domain-containing protein. (310 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (617 aa)
XRCC1X-ray repair cross complementing 1. (632 aa)
SEM1Uncharacterized protein. (63 aa)
MCM3DNA helicase; Belongs to the MCM family. (808 aa)
SFR1SWI5 dependent homologous recombination repair protein 1. (232 aa)
HELQHelicase, POLQ like. (1115 aa)
REC8REC8 meiotic recombination protein. (564 aa)
RAD54LRAD54 like. (749 aa)
NSMCE1NSE1 homolog, SMC5-SMC6 complex component. (266 aa)
RPA2Replication protein A2. (270 aa)
ANKLE1Ankyrin repeat and LEM domain containing 1. (487 aa)
MMS22LMMS22 like, DNA repair protein. (1244 aa)
RAD51DDNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents; Belongs to the RecA family. RAD51 subfamily. (338 aa)
MCM2DNA helicase; Belongs to the MCM family. (1061 aa)
ENSCHIP00000003676RECA_2 domain-containing protein. (278 aa)
FSBPUncharacterized protein. (909 aa)
ZSWIM7Zinc finger SWIM-type containing 7. (141 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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