9 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACSF3	Acyl-CoA synthetase family member 3. (586 aa)
	SLC27A1	Solute carrier family 27 member 1. (646 aa)
	SLC27A4	Solute carrier family 27 member 4. (643 aa)
	SLC27A6	Solute carrier family 27 member 6. (634 aa)
	SLC27A3	Solute carrier family 27 member 3. (643 aa)
	SLC27A2	Solute carrier family 27 member 2. (620 aa)
	ACSBG1	Acyl-CoA synthetase bubblegum family member 1. (765 aa)
	SLC27A5	Solute carrier family 27 member 5. (690 aa)
	ACSL4	Acyl-CoA synthetase long chain family member 4. (711 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACSBG1	ACSL4	ENSCHIP00000008229	ENSCHIP00000000112	Acyl-CoA synthetase bubblegum family member 1.	Acyl-CoA synthetase long chain family member 4.	0.747
ACSF3	ACSL4	ENSCHIP00000010176	ENSCHIP00000000112	Acyl-CoA synthetase family member 3.	Acyl-CoA synthetase long chain family member 4.	0.431
ACSL4	ACSBG1	ENSCHIP00000000112	ENSCHIP00000008229	Acyl-CoA synthetase long chain family member 4.	Acyl-CoA synthetase bubblegum family member 1.	0.747
ACSL4	ACSF3	ENSCHIP00000000112	ENSCHIP00000010176	Acyl-CoA synthetase long chain family member 4.	Acyl-CoA synthetase family member 3.	0.431
SLC27A1	SLC27A4	ENSCHIP00000033688	ENSCHIP00000032560	Solute carrier family 27 member 1.	Solute carrier family 27 member 4.	0.911
SLC27A4	SLC27A1	ENSCHIP00000032560	ENSCHIP00000033688	Solute carrier family 27 member 4.	Solute carrier family 27 member 1.	0.911