25 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSCHIP00000000025	Uncharacterized protein. (552 aa)
	FMR1	Fragile X mental retardation 1. (632 aa)
	SHMT2	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (502 aa)
	LOC102176764	Uncharacterized protein. (442 aa)
	ENSCHIP00000006258	Uncharacterized protein. (474 aa)
	ENSCHIP00000006449	Uncharacterized protein. (168 aa)
	RPS14	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	ENSCHIP00000009864	Uncharacterized protein. (130 aa)
	SHMT1	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (484 aa)
	LARP6	La ribonucleoprotein domain family member 6. (492 aa)
	LARP1	La ribonucleoprotein domain family member 1. (1144 aa)
	ENSCHIP00000013170	Uncharacterized protein. (147 aa)
	IGF2BP2	Insulin like growth factor 2 mRNA binding protein 2. (599 aa)
	DHX36	DEAH-box helicase 36. (1010 aa)
	CCT5	Chaperonin containing TCP1 subunit 5. (541 aa)
	RSL1D1	Uncharacterized protein. (484 aa)
	MYH10	Myosin heavy chain 10; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1975 aa)
	UTP23	UTP23 small subunit processome component. (248 aa)
	MRPS11	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (197 aa)
	GNL3	G protein nucleolar 3. (544 aa)
	IGF2BP1	Insulin like growth factor 2 mRNA binding protein 1. (577 aa)
	ENSCHIP00000027351	Uncharacterized protein. (150 aa)
	SYNCRIP	Synaptotagmin binding cytoplasmic RNA interacting protein. (623 aa)
	DDX3X	Uncharacterized protein; Belongs to the DEAD box helicase family. (661 aa)
	IGF2BP3	Insulin like growth factor 2 mRNA binding protein 3. (580 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCT5	ENSCHIP00000009864	ENSCHIP00000019052	ENSCHIP00000009864	Chaperonin containing TCP1 subunit 5.	Uncharacterized protein.	0.406
DDX3X	DHX36	ENSCHIP00000029996	ENSCHIP00000017801	Uncharacterized protein; Belongs to the DEAD box helicase family.	DEAH-box helicase 36.	0.707
DDX3X	FMR1	ENSCHIP00000029996	ENSCHIP00000000274	Uncharacterized protein; Belongs to the DEAD box helicase family.	Fragile X mental retardation 1.	0.430
DDX3X	LARP1	ENSCHIP00000029996	ENSCHIP00000012790	Uncharacterized protein; Belongs to the DEAD box helicase family.	La ribonucleoprotein domain family member 1.	0.463
DDX3X	RSL1D1	ENSCHIP00000029996	ENSCHIP00000019757	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.510
DDX3X	SYNCRIP	ENSCHIP00000029996	ENSCHIP00000029588	Uncharacterized protein; Belongs to the DEAD box helicase family.	Synaptotagmin binding cytoplasmic RNA interacting protein.	0.509
DHX36	DDX3X	ENSCHIP00000017801	ENSCHIP00000029996	DEAH-box helicase 36.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.707
DHX36	FMR1	ENSCHIP00000017801	ENSCHIP00000000274	DEAH-box helicase 36.	Fragile X mental retardation 1.	0.458
ENSCHIP00000006258	ENSCHIP00000009864	ENSCHIP00000006258	ENSCHIP00000009864	Uncharacterized protein.	Uncharacterized protein.	0.423
ENSCHIP00000006449	ENSCHIP00000009864	ENSCHIP00000006449	ENSCHIP00000009864	Uncharacterized protein.	Uncharacterized protein.	0.806
ENSCHIP00000006449	ENSCHIP00000013170	ENSCHIP00000006449	ENSCHIP00000013170	Uncharacterized protein.	Uncharacterized protein.	0.806
ENSCHIP00000006449	ENSCHIP00000027351	ENSCHIP00000006449	ENSCHIP00000027351	Uncharacterized protein.	Uncharacterized protein.	0.806
ENSCHIP00000006449	LOC102176764	ENSCHIP00000006449	ENSCHIP00000005892	Uncharacterized protein.	Uncharacterized protein.	0.505
ENSCHIP00000006449	MRPS11	ENSCHIP00000006449	ENSCHIP00000025086	Uncharacterized protein.	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.730
ENSCHIP00000006449	RPS14	ENSCHIP00000006449	ENSCHIP00000009688	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.806
ENSCHIP00000006449	RSL1D1	ENSCHIP00000006449	ENSCHIP00000019757	Uncharacterized protein.	Uncharacterized protein.	0.505
ENSCHIP00000009864	CCT5	ENSCHIP00000009864	ENSCHIP00000019052	Uncharacterized protein.	Chaperonin containing TCP1 subunit 5.	0.406
ENSCHIP00000009864	ENSCHIP00000006258	ENSCHIP00000009864	ENSCHIP00000006258	Uncharacterized protein.	Uncharacterized protein.	0.423
ENSCHIP00000009864	ENSCHIP00000006449	ENSCHIP00000009864	ENSCHIP00000006449	Uncharacterized protein.	Uncharacterized protein.	0.806
ENSCHIP00000009864	LOC102176764	ENSCHIP00000009864	ENSCHIP00000005892	Uncharacterized protein.	Uncharacterized protein.	0.482