STRINGSTRING
USH1C USH1C NECTIN1 NECTIN1 CRB2 CRB2 AQP1 AQP1 ENSCHIP00000033272 ENSCHIP00000033272 ENSCHIP00000033531 ENSCHIP00000033531 MEIS1 MEIS1 CRB1 CRB1 VHL VHL COL8A2 COL8A2 PTF1A PTF1A FOXN4 FOXN4 THY1 THY1 SP3 SP3 HCN1 HCN1 RP1 RP1 NRL NRL AHI1 AHI1 CTNNB1 CTNNB1 NAGLU NAGLU RORB RORB TH TH PROM1 PROM1 RPGRIP1 RPGRIP1 PAX6 PAX6 MEGF11 MEGF11 NTRK2 NTRK2 RPE65 RPE65 VSX1 VSX1 EPHB2 EPHB2 RS1 RS1 NOTCH2 NOTCH2 LHX1 LHX1 THRB THRB KDM2B KDM2B SOX9 SOX9 IGFN1 IGFN1 PROX1 PROX1 HIPK2 HIPK2 NOTCH1 NOTCH1 BMP4 BMP4 CALB1 CALB1 JAG1 JAG1 C12orf57 C12orf57 DLL1 DLL1 ALDH1A3 ALDH1A3 STRA6 STRA6 FOXF2 FOXF2 STAT3 STAT3 SDK1 SDK1 ZHX2 ZHX2 LRP5 LRP5 EPHB1 EPHB1 RDH13 RDH13 TFAP2A TFAP2A FAT1 FAT1 SDK2 SDK2 PHACTR4 PHACTR4 LCTL LCTL SOX8 SOX8 TBC1D20 TBC1D20 PDE6C PDE6C RPGRIP1L RPGRIP1L IHH IHH COL8A1 COL8A1 MFN2 MFN2 ZEB1 ZEB1 TTN TTN BAK1 BAK1 TTC8 TTC8 RING1 RING1 HIF1A HIF1A EPHA2 EPHA2 GLI3 GLI3 MYPN MYPN PTPRM PTPRM BBS4 BBS4 ATF4 ATF4 TBX2 TBX2 GNAT2 GNAT2 NF2 NF2 YY1 YY1 TSPAN12 TSPAN12 BHLHE23 BHLHE23 CABP4 CABP4 MAN2A1 MAN2A1 DSCAM DSCAM NF1 NF1 FRS2 FRS2 CNTF CNTF FAT3 FAT3 PITX2 PITX2 IMPG2 IMPG2 ROM1 ROM1 BMP7 BMP7 AQP5 AQP5 TFAP2B TFAP2B FZD5 FZD5 HIPK1 HIPK1 KDR KDR CDON CDON MFSD2A MFSD2A TDRD7 TDRD7 FOXE3 FOXE3 PITX3 PITX3 BCAR3 BCAR3 TSKU TSKU FJX1 FJX1 GDF11 GDF11
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
USH1CUSH1 protein network component harmonin. (877 aa)
NECTIN1Nectin cell adhesion molecule 1. (515 aa)
CRB2Crumbs cell polarity complex component 2. (1275 aa)
AQP1Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (271 aa)
ENSCHIP00000033272FERM domain-containing protein. (580 aa)
ENSCHIP00000033531Uncharacterized protein. (561 aa)
MEIS1Meis homeobox 1. (465 aa)
CRB1Crumbs cell polarity complex component 1. (1409 aa)
VHLUncharacterized protein. (181 aa)
COL8A2Collagen type VIII alpha 2 chain. (704 aa)
PTF1APancreas associated transcription factor 1a. (325 aa)
FOXN4Forkhead box N4. (518 aa)
THY1Thy-1 cell surface antigen. (161 aa)
SP3Sp3 transcription factor. (778 aa)
HCN1Hyperpolarization activated cyclic nucleotide gated potassium channel 1. (877 aa)
RP1RP1 axonemal microtubule associated. (2115 aa)
NRLNeural retina leucine zipper. (262 aa)
AHI1Abelson helper integration site 1. (1194 aa)
CTNNB1Catenin beta 1. (781 aa)
NAGLUN-acetyl-alpha-glucosaminidase. (741 aa)
RORBRAR related orphan receptor B. (468 aa)
THTyrosine hydroxylase. (516 aa)
PROM1Prominin 1. (855 aa)
RPGRIP1RPGR interacting protein 1. (1216 aa)
PAX6Paired box 6. (486 aa)
MEGF11Multiple EGF like domains 11. (1044 aa)
NTRK2Tyrosine-protein kinase receptor. (837 aa)
RPE65Retinoid isomerohydrolase RPE65. (533 aa)
VSX1Visual system homeobox 1. (365 aa)
EPHB2EPH receptor B2. (1016 aa)
RS1Retinoschisin 1. (224 aa)
NOTCH2Notch receptor 2. (2471 aa)
LHX1LIM homeobox 1. (406 aa)
THRBThyroid hormone receptor beta. (476 aa)
KDM2BLysine demethylase 2B. (1309 aa)
SOX9SRY-box transcription factor 9. (525 aa)
IGFN1Uncharacterized protein. (1295 aa)
PROX1Prospero homeobox 1. (734 aa)
HIPK2Homeodomain interacting protein kinase 2. (1228 aa)
NOTCH1Notch receptor 1. (2508 aa)
BMP4Bone morphogenetic protein 4. (409 aa)
CALB1Calbindin 1. (261 aa)
JAG1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1218 aa)
C12orf57Chromosome 12 open reading frame 57. (139 aa)
DLL1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (724 aa)
ALDH1A3Aldehyde dehydrogenase 1 family member A3; Belongs to the aldehyde dehydrogenase family. (512 aa)
STRA6Stimulated by retinoic acid 6. (654 aa)
FOXF2Forkhead box F2. (437 aa)
STAT3Signal transducer and activator of transcription. (770 aa)
SDK1Sidekick cell adhesion molecule 1. (2045 aa)
ZHX2Zinc fingers and homeoboxes 2. (836 aa)
LRP5Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family. (1615 aa)
EPHB1EPH receptor B1. (984 aa)
RDH13Retinol dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (335 aa)
TFAP2ATranscription factor AP-2 alpha. (485 aa)
FAT1FAT atypical cadherin 1. (4643 aa)
SDK2Sidekick cell adhesion molecule 2. (2331 aa)
PHACTR4Phosphatase and actin regulator. (714 aa)
LCTLLactase like; Belongs to the glycosyl hydrolase 1 family. (541 aa)
SOX8SRY-box transcription factor 8. (534 aa)
TBC1D20TBC1 domain family member 20. (403 aa)
PDE6CPhosphodiesterase. (845 aa)
RPGRIP1LRPGRIP1 like. (1295 aa)
IHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (410 aa)
COL8A1Collagen type VIII alpha 1 chain. (745 aa)
MFN2Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (757 aa)
ZEB1Zinc finger E-box binding homeobox 1. (1127 aa)
TTNUncharacterized protein. (2149 aa)
BAK1BCL2 antagonist/killer 1. (211 aa)
TTC8Tetratricopeptide repeat domain 8. (511 aa)
RING1Ring finger protein 1. (407 aa)
HIF1AUncharacterized protein. (823 aa)
EPHA2EPH receptor A2. (975 aa)
GLI3GLI family zinc finger 3. (1614 aa)
MYPNMyopalladin. (1320 aa)
PTPRMProtein tyrosine phosphatase receptor type M. (1495 aa)
BBS4Bardet-Biedl syndrome 4. (519 aa)
ATF4Activating transcription factor 4. (352 aa)
TBX2T-box transcription factor 2. (771 aa)
GNAT2G protein subunit alpha transducin 2. (354 aa)
NF2FERM domain-containing protein. (612 aa)
YY1YY1 transcription factor. (415 aa)
TSPAN12Tetraspanin. (305 aa)
BHLHE23Basic helix-loop-helix family member e23. (222 aa)
CABP4Calcium binding protein 4. (279 aa)
MAN2A1Alpha-mannosidase. (1154 aa)
DSCAMDS cell adhesion molecule. (1852 aa)
NF1Neurofibromin 1. (2848 aa)
FRS2Fibroblast growth factor receptor substrate 2. (508 aa)
CNTFCiliary neurotrophic factor. (199 aa)
FAT3Uncharacterized protein. (891 aa)
PITX2Homeobox protein. (325 aa)
IMPG2Interphotoreceptor matrix proteoglycan 2. (1207 aa)
ROM1Retinal outer segment membrane protein 1. (349 aa)
BMP7Bone morphogenetic protein 7. (431 aa)
AQP5Aquaporin 5; Belongs to the MIP/aquaporin (TC 1.A.8) family. (265 aa)
TFAP2BTranscription factor AP-2 beta. (476 aa)
FZD5Frizzled class receptor 5; Belongs to the G-protein coupled receptor Fz/Smo family. (585 aa)
HIPK1Homeodomain interacting protein kinase 1. (1210 aa)
KDRKinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1390 aa)
CDONCell adhesion associated, oncogene regulated. (1254 aa)
MFSD2AMajor facilitator superfamily domain containing 2A. (524 aa)
TDRD7Tudor domain containing 7. (1098 aa)
FOXE3Forkhead box E3. (315 aa)
PITX3Homeobox protein. (302 aa)
BCAR3BCAR3 adaptor protein, NSP family member. (826 aa)
TSKUTsukushi, small leucine rich proteoglycan. (359 aa)
FJX1Four-jointed box kinase 1. (437 aa)
GDF11Growth differentiation factor 11. (406 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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