STRINGSTRING
SETD7 SETD7 JARID2 JARID2 EHMT2 EHMT2 ATRX ATRX MECP2 MECP2 LMNA LMNA KDM4A KDM4A KDM3A KDM3A PIH1D1 PIH1D1 RIF1 RIF1 DMRTC2 DMRTC2 SMARCB1 SMARCB1 PAX5 PAX5 ZNF274 ZNF274 ZNF304 ZNF304 KDM4B KDM4B PRDM12 PRDM12 DNMT1 DNMT1 SIRT1 SIRT1 EHMT1 EHMT1 MYB MYB BRCA1 BRCA1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SETD7SET domain containing 7, histone lysine methyltransferase. (407 aa)
JARID2Jumonji and AT-rich interaction domain containing 2. (1258 aa)
EHMT2Euchromatic histone lysine methyltransferase 2. (1268 aa)
ATRXATRX chromatin remodeler. (2105 aa)
MECP2Methyl-CpG-binding protein 2; Chromosomal protein that binds to methylated DNA. It can bind specifically to a single methyl-CpG pair. It is not influenced by sequences flanking the methyl-CpGs. Binds both 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC)-containing DNA, with a preference for 5-methylcytosine (5mC). (481 aa)
LMNALamin A/C; Belongs to the intermediate filament family. (665 aa)
KDM4AUncharacterized protein. (1067 aa)
KDM3ALysine demethylase 3A. (1362 aa)
PIH1D1PIH1 domain containing 1. (290 aa)
RIF1Replication timing regulatory factor 1. (2486 aa)
DMRTC2DMRT like family C2. (370 aa)
SMARCB1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (395 aa)
PAX5Paired box 5. (392 aa)
ZNF274Zinc finger protein 274. (611 aa)
ZNF304Zinc finger protein 304. (662 aa)
KDM4BLysine demethylase 4B. (1070 aa)
PRDM12PR domain zinc finger protein 12; Involved in the positive regulation of histone H3-K9 dimethylation; Belongs to the class V-like SAM-binding methyltransferase superfamily. (362 aa)
DNMT1DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1591 aa)
SIRT1Deacetylase sirtuin-type domain-containing protein. (732 aa)
EHMT1Euchromatic histone lysine methyltransferase 1. (1293 aa)
MYBMYB proto-oncogene, transcription factor. (640 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1843 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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