STRINGSTRING
SERPINH1 SERPINH1 MATN1 MATN1 EXT1 EXT1 COL2A1 COL2A1 CBS CBS ATF2 ATF2 TGFBR2 TGFBR2 RARB RARB ENSCHIP00000009938 ENSCHIP00000009938 TRPV4 TRPV4 ZMPSTE24 ZMPSTE24 RARA RARA COMP COMP SDC3 SDC3 THBS3 THBS3 SHOX2 SHOX2 ANXA6 ANXA6 IHH IHH CER1 CER1 SCUBE2 SCUBE2 SMPD3 SMPD3 AXIN2 AXIN2 HOXA11 HOXA11 MMP13 MMP13 COL1A1 COL1A1 NPPC NPPC SOX9 SOX9 RARG RARG TRIP11 TRIP11 ENSCHIP00000029297 ENSCHIP00000029297 IFT80 IFT80
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SERPINH1Serpin family H member 1; Belongs to the serpin family. (418 aa)
MATN1Matrilin 1. (480 aa)
EXT1Exostosin glycosyltransferase 1; Belongs to the glycosyltransferase 47 family. (446 aa)
COL2A1Collagen type II alpha 1 chain. (1259 aa)
CBSCystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (586 aa)
ATF2Cyclic AMP-dependent transcription factor ATF-2; Transcriptional activator which regulates the transcription of various genes, including those involved in anti-apoptosis, cell growth, and DNA damage response. Dependent on its binding partner, binds to CRE (cAMP response element) consensus sequences (5'-TGACGTCA- 3') or to AP-1 (activator protein 1) consensus sequences (5'-TGACTCA- 3'); Belongs to the bZIP family. (505 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (550 aa)
RARBRetinoic acid receptor beta. (448 aa)
ENSCHIP00000009938Annexin. (100 aa)
TRPV4Transient receptor potential cation channel subfamily V member 4; Belongs to the transient receptor (TC 1.A.4) family. (871 aa)
ZMPSTE24CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (475 aa)
RARARetinoic acid receptor alpha. (462 aa)
COMPCartilage oligomeric matrix protein. (757 aa)
SDC3Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (442 aa)
THBS3Thrombospondin 3. (984 aa)
SHOX2Short stature homeobox 2. (319 aa)
ANXA6Annexin. (689 aa)
IHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (410 aa)
CER1Cerberus 1, DAN family BMP antagonist. (263 aa)
SCUBE2Signal peptide, CUB domain and EGF like domain containing 2. (1022 aa)
SMPD3Sphingomyelin phosphodiesterase 3. (656 aa)
AXIN2Axin 2. (844 aa)
HOXA11Homeobox A11. (317 aa)
MMP13Matrix metallopeptidase 13. (472 aa)
COL1A1Collagen type I alpha 1 chain. (1463 aa)
NPPCNatriuretic peptide C. (126 aa)
SOX9SRY-box transcription factor 9. (525 aa)
RARGRetinoic acid receptor gamma. (458 aa)
TRIP11Thyroid hormone receptor interactor 11. (1975 aa)
ENSCHIP00000029297Syndecan domain-containing protein. (407 aa)
IFT80Intraflagellar transport 80. (771 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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