STRINGSTRING
SOX9 SOX9 HOXA5 HOXA5 ADAMTSL2 ADAMTSL2 TGFBR2 TGFBR2 AGR2 AGR2 SRF SRF SPDEF SPDEF BMP4 BMP4 TULP3 TULP3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SOX9SRY-box transcription factor 9. (525 aa)
HOXA5Homeobox A5. (270 aa)
ADAMTSL2ADAMTS like 2. (957 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (550 aa)
AGR2Anterior gradient 2, protein disulphide isomerase family member. (175 aa)
SRFSerum response factor. (509 aa)
SPDEFSAM pointed domain containing ETS transcription factor. (330 aa)
BMP4Bone morphogenetic protein 4. (409 aa)
TULP3Tubby-like protein; Belongs to the TUB family. (488 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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