16 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SNRNP200	Small nuclear ribonucleoprotein U5 subunit 200. (2146 aa)
	EIF4A3	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (411 aa)
	MAGOHB	Uncharacterized protein. (148 aa)
	ENSCHIP00000002186	Uncharacterized protein. (123 aa)
	CASC3	CASC3 exon junction complex subunit. (700 aa)
	LOC102174442	Uncharacterized protein. (284 aa)
	ENSCHIP00000006634	Uncharacterized protein. (132 aa)
	RBM8A	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
	ENSCHIP00000009900	Uncharacterized protein. (130 aa)
	CWC25	CWC25 spliceosome associated protein homolog. (425 aa)
	RBM22	RNA binding motif protein 22. (420 aa)
	LOC102173595	Uncharacterized protein. (314 aa)
	YJU2	Uncharacterized protein. (320 aa)
	CWC22	CWC22 spliceosome associated protein homolog. (900 aa)
	PRPF8	Pre-mRNA processing factor 8. (2335 aa)
	PRPF19	Pre-mRNA processing factor 19. (504 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CASC3	CWC22	ENSCHIP00000002799	ENSCHIP00000017260	CASC3 exon junction complex subunit.	CWC22 spliceosome associated protein homolog.	0.877
CASC3	CWC25	ENSCHIP00000002799	ENSCHIP00000013770	CASC3 exon junction complex subunit.	CWC25 spliceosome associated protein homolog.	0.683
CASC3	EIF4A3	ENSCHIP00000002799	ENSCHIP00000029017	CASC3 exon junction complex subunit.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.999
CASC3	ENSCHIP00000002186	ENSCHIP00000002799	ENSCHIP00000002186	CASC3 exon junction complex subunit.	Uncharacterized protein.	0.857
CASC3	ENSCHIP00000006634	ENSCHIP00000002799	ENSCHIP00000006634	CASC3 exon junction complex subunit.	Uncharacterized protein.	0.857
CASC3	ENSCHIP00000009900	ENSCHIP00000002799	ENSCHIP00000009900	CASC3 exon junction complex subunit.	Uncharacterized protein.	0.857
CASC3	LOC102173595	ENSCHIP00000002799	ENSCHIP00000016142	CASC3 exon junction complex subunit.	Uncharacterized protein.	0.629
CASC3	LOC102174442	ENSCHIP00000002799	ENSCHIP00000004085	CASC3 exon junction complex subunit.	Uncharacterized protein.	0.629
CASC3	MAGOHB	ENSCHIP00000002799	ENSCHIP00000033788	CASC3 exon junction complex subunit.	Uncharacterized protein.	0.953
CASC3	PRPF19	ENSCHIP00000002799	ENSCHIP00000019231	CASC3 exon junction complex subunit.	Pre-mRNA processing factor 19.	0.526
CASC3	PRPF8	ENSCHIP00000002799	ENSCHIP00000017874	CASC3 exon junction complex subunit.	Pre-mRNA processing factor 8.	0.683
CASC3	RBM22	ENSCHIP00000002799	ENSCHIP00000014616	CASC3 exon junction complex subunit.	RNA binding motif protein 22.	0.526
CASC3	RBM8A	ENSCHIP00000002799	ENSCHIP00000009150	CASC3 exon junction complex subunit.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.999
CASC3	SNRNP200	ENSCHIP00000002799	ENSCHIP00000022847	CASC3 exon junction complex subunit.	Small nuclear ribonucleoprotein U5 subunit 200.	0.726
CASC3	YJU2	ENSCHIP00000002799	ENSCHIP00000016936	CASC3 exon junction complex subunit.	Uncharacterized protein.	0.629
CWC22	CASC3	ENSCHIP00000017260	ENSCHIP00000002799	CWC22 spliceosome associated protein homolog.	CASC3 exon junction complex subunit.	0.877
CWC22	CWC25	ENSCHIP00000017260	ENSCHIP00000013770	CWC22 spliceosome associated protein homolog.	CWC25 spliceosome associated protein homolog.	0.980
CWC22	EIF4A3	ENSCHIP00000017260	ENSCHIP00000029017	CWC22 spliceosome associated protein homolog.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.998
CWC22	ENSCHIP00000002186	ENSCHIP00000017260	ENSCHIP00000002186	CWC22 spliceosome associated protein homolog.	Uncharacterized protein.	0.510
CWC22	ENSCHIP00000006634	ENSCHIP00000017260	ENSCHIP00000006634	CWC22 spliceosome associated protein homolog.	Uncharacterized protein.	0.510