(9 nodes) Lysosomal membrane organization network (Capra hircus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108637894	Uncharacterized protein. (211 aa)
	ATP10B	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1459 aa)
	LAPTM4A	Lysosomal protein transmembrane 4 alpha. (233 aa)
	ENSCHIP00000025165	Uncharacterized protein. (194 aa)
	MT3	Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals. (68 aa)
	ENSCHIP00000013872	Uncharacterized protein. (197 aa)
	LAPTM5	Lysosomal protein transmembrane 5. (264 aa)
	LAPTM4B	Uncharacterized protein. (226 aa)
	LOC102188868	Uncharacterized protein. (222 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LAPTM4A	LAPTM4B	ENSCHIP00000025528	ENSCHIP00000003742	Lysosomal protein transmembrane 4 alpha.	Uncharacterized protein.	0.914
LAPTM4A	LAPTM5	ENSCHIP00000025528	ENSCHIP00000012049	Lysosomal protein transmembrane 4 alpha.	Lysosomal protein transmembrane 5.	0.903
LAPTM4B	LAPTM4A	ENSCHIP00000003742	ENSCHIP00000025528	Uncharacterized protein.	Lysosomal protein transmembrane 4 alpha.	0.914
LAPTM4B	LAPTM5	ENSCHIP00000003742	ENSCHIP00000012049	Uncharacterized protein.	Lysosomal protein transmembrane 5.	0.927
LAPTM5	LAPTM4A	ENSCHIP00000012049	ENSCHIP00000025528	Lysosomal protein transmembrane 5.	Lysosomal protein transmembrane 4 alpha.	0.903
LAPTM5	LAPTM4B	ENSCHIP00000012049	ENSCHIP00000003742	Lysosomal protein transmembrane 5.	Uncharacterized protein.	0.927