STRINGSTRING
OTOL1 OTOL1 COL4A2 COL4A2 COL5A3 COL5A3 COL4A4 COL4A4 COL16A1 COL16A1 LUM LUM COL1A1 COL1A1 COL5A2 COL5A2 COL11A1 COL11A1 COL11A2 COL11A2 COL2A1 COL2A1 COL10A1 COL10A1 COL4A6 COL4A6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OTOL1Otolin 1. (473 aa)
COL4A2Collagen type IV alpha 2 chain. (1607 aa)
COL5A3Collagen type V alpha 3 chain. (1455 aa)
COL4A4Collagen type IV alpha 4 chain. (1434 aa)
COL16A1Collagen type XVI alpha 1 chain. (1414 aa)
LUMLumican. (342 aa)
COL1A1Collagen type I alpha 1 chain. (1463 aa)
COL5A2Collagen type V alpha 2 chain. (1252 aa)
COL11A1Collagen type XI alpha 1 chain. (1323 aa)
COL11A2Collagen type XI alpha 2 chain. (1583 aa)
COL2A1Collagen type II alpha 1 chain. (1259 aa)
COL10A1Collagen type X alpha 1 chain. (674 aa)
COL4A6Collagen IV NC1 domain-containing protein. (170 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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