19 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FANCB	Uncharacterized protein. (447 aa)
	UBQLN4	Ubiquilin 4. (601 aa)
	SHLD1	Shieldin complex subunit 1. (206 aa)
	POLQ	DNA polymerase theta. (2587 aa)
	MAD2L2	Mitotic arrest deficient 2 like 2. (195 aa)
	TP53BP1	Tumor protein p53 binding protein 1. (1966 aa)
	RECQL5	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (991 aa)
	SMCHD1	Structural maintenance of chromosomes flexible hinge domain containing 1. (1987 aa)
	SHLD2	Shieldin complex subunit 2. (918 aa)
	ENSCHIP00000031621	Uncharacterized protein. (159 aa)
	HELB	DNA helicase B. (1077 aa)
	PARPBP	PARP1 binding protein. (580 aa)
	RADX	RPA1 related single stranded DNA binding protein, X-linked. (764 aa)
	RMI2	Uncharacterized protein. (161 aa)
	KLHL15	Kelch like family member 15. (604 aa)
	RIF1	Replication timing regulatory factor 1. (2486 aa)
	CGAS	Cyclic GMP-AMP synthase. (511 aa)
	MAGEF1	MAGE family member F1. (299 aa)
	FBH1	F-box DNA helicase 1. (1048 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCHIP00000031621	POLQ	ENSCHIP00000031621	ENSCHIP00000011845	Uncharacterized protein.	DNA polymerase theta.	0.478
ENSCHIP00000031621	RECQL5	ENSCHIP00000031621	ENSCHIP00000005703	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.662
ENSCHIP00000031621	RMI2	ENSCHIP00000031621	ENSCHIP00000024473	Uncharacterized protein.	Uncharacterized protein.	0.900
FANCB	POLQ	ENSCHIP00000014817	ENSCHIP00000011845	Uncharacterized protein.	DNA polymerase theta.	0.487
FBH1	HELB	ENSCHIP00000015825	ENSCHIP00000033771	F-box DNA helicase 1.	DNA helicase B.	0.668
FBH1	POLQ	ENSCHIP00000015825	ENSCHIP00000011845	F-box DNA helicase 1.	DNA polymerase theta.	0.458
FBH1	RADX	ENSCHIP00000015825	ENSCHIP00000024886	F-box DNA helicase 1.	RPA1 related single stranded DNA binding protein, X-linked.	0.555
FBH1	RECQL5	ENSCHIP00000015825	ENSCHIP00000005703	F-box DNA helicase 1.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.858
FBH1	TP53BP1	ENSCHIP00000015825	ENSCHIP00000006382	F-box DNA helicase 1.	Tumor protein p53 binding protein 1.	0.582
HELB	FBH1	ENSCHIP00000033771	ENSCHIP00000015825	DNA helicase B.	F-box DNA helicase 1.	0.668
HELB	RECQL5	ENSCHIP00000033771	ENSCHIP00000005703	DNA helicase B.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.503
MAD2L2	POLQ	ENSCHIP00000007549	ENSCHIP00000011845	Mitotic arrest deficient 2 like 2.	DNA polymerase theta.	0.616
MAD2L2	RIF1	ENSCHIP00000007549	ENSCHIP00000022306	Mitotic arrest deficient 2 like 2.	Replication timing regulatory factor 1.	0.431
MAD2L2	SHLD1	ENSCHIP00000007549	ENSCHIP00000013558	Mitotic arrest deficient 2 like 2.	Shieldin complex subunit 1.	0.758
MAD2L2	SHLD2	ENSCHIP00000007549	ENSCHIP00000000332	Mitotic arrest deficient 2 like 2.	Shieldin complex subunit 2.	0.963
MAD2L2	TP53BP1	ENSCHIP00000007549	ENSCHIP00000006382	Mitotic arrest deficient 2 like 2.	Tumor protein p53 binding protein 1.	0.706
POLQ	ENSCHIP00000031621	ENSCHIP00000011845	ENSCHIP00000031621	DNA polymerase theta.	Uncharacterized protein.	0.478
POLQ	FANCB	ENSCHIP00000011845	ENSCHIP00000014817	DNA polymerase theta.	Uncharacterized protein.	0.487
POLQ	FBH1	ENSCHIP00000011845	ENSCHIP00000015825	DNA polymerase theta.	F-box DNA helicase 1.	0.458
POLQ	MAD2L2	ENSCHIP00000011845	ENSCHIP00000007549	DNA polymerase theta.	Mitotic arrest deficient 2 like 2.	0.616