STRINGSTRING
ENSCHIP00000002590 ENSCHIP00000002590 ENSCHIP00000033776 ENSCHIP00000033776 POLR2A POLR2A TAF5L TAF5L GTF2F2 GTF2F2 PRIM1 PRIM1 WDR61 WDR61 POLR2D POLR2D PRIM2 PRIM2 ENSCHIP00000030962 ENSCHIP00000030962 TWISTNB TWISTNB TAF2 TAF2 CDK7 CDK7 CCNH CCNH POLR2G POLR2G RPRD1B RPRD1B ERCC2 ERCC2 POLR2L POLR2L TCEA1 TCEA1 POLR3C POLR3C CDC73 CDC73 TAF4B TAF4B CD3EAP CD3EAP MNAT1 MNAT1 POLR1D POLR1D CINP CINP ENSCHIP00000024700 ENSCHIP00000024700 POLA2 POLA2 ENSCHIP00000024081 ENSCHIP00000024081 GTF2E2 GTF2E2 LOC102176868 LOC102176868 POLR3K POLR3K TAF1 TAF1 ENSCHIP00000021995 ENSCHIP00000021995 POLI POLI ENSCHIP00000021672 ENSCHIP00000021672 ZNRD1 ZNRD1 RPAP2 RPAP2 POLR1E POLR1E GTF2A1L GTF2A1L RPRD1A RPRD1A PGM1 PGM1 ENSCHIP00000019473 ENSCHIP00000019473 POLR1A POLR1A RO60 RO60 TAF8 TAF8 POLR3G POLR3G ENSCHIP00000018712 ENSCHIP00000018712 DHX57 DHX57 ENSCHIP00000016839 ENSCHIP00000016839 POLA1 POLA1 RTF1 RTF1 ENSCHIP00000016318 ENSCHIP00000016318 SUPT3H SUPT3H PEPD PEPD GTF2A2 GTF2A2 ENSCHIP00000013506 ENSCHIP00000013506 POLR3F POLR3F POLR3E POLR3E ENSCHIP00000013021 ENSCHIP00000013021 POLR1B POLR1B C22orf23 C22orf23 LEO1 LEO1 POLR2E POLR2E UPK3BL2 UPK3BL2 POLR3H POLR3H POLRMT POLRMT WDR47 WDR47 POLR2F POLR2F POLR2K POLR2K TAF4 TAF4 LOC102185505 LOC102185505 GTF2A1 GTF2A1 GTF2H3 GTF2H3 POLR3D POLR3D POLR2C POLR2C GTF2F1 GTF2F1 POLR2I POLR2I CTR9 CTR9 PAF1 PAF1 PEX2 PEX2 POLR2B POLR2B GTF2E1 GTF2E1 ENSCHIP00000007326 ENSCHIP00000007326 LOC102183623 LOC102183623 ENSCHIP00000006342 ENSCHIP00000006342 RECQL5 RECQL5 ENSCHIP00000005370 ENSCHIP00000005370 SH3BP5L SH3BP5L ENSCHIP00000005284 ENSCHIP00000005284 POLR2J POLR2J LAP3 LAP3 ENSCHIP00000003603 ENSCHIP00000003603 POLR2H POLR2H TAF3 TAF3 POLR1C POLR1C ENSCHIP00000001883 ENSCHIP00000001883 POLR2M POLR2M ENSCHIP00000000518 ENSCHIP00000000518 POLR3A POLR3A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSCHIP00000002590WD_REPEATS_REGION domain-containing protein. (495 aa)
ENSCHIP00000033776Uncharacterized protein. (109 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
TAF5LUncharacterized protein. (589 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
PRIM1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (401 aa)
WDR61WD_REPEATS_REGION domain-containing protein. (305 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
PRIM2Uncharacterized protein. (219 aa)
ENSCHIP00000030962Uncharacterized protein. (275 aa)
TWISTNBTWIST neighbor. (334 aa)
TAF2TATA-box binding protein associated factor 2. (1187 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (347 aa)
CCNHCyclin H; Belongs to the cyclin family. (329 aa)
POLR2GRNA polymerase II subunit G. (189 aa)
RPRD1BRPR domain containing protein. (326 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (760 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
TCEA1Uncharacterized protein. (361 aa)
POLR3CRNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (534 aa)
CDC73Cell division cycle 73. (531 aa)
TAF4BTATA-box binding protein associated factor 4b. (871 aa)
CD3EAPCD3e molecule associated protein. (536 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
POLR1DRNA polymerase I and III subunit D. (133 aa)
CINPCyclin dependent kinase 2 interacting protein. (211 aa)
ENSCHIP00000024700Uncharacterized protein. (111 aa)
POLA2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (603 aa)
ENSCHIP00000024081WD_REPEATS_REGION domain-containing protein. (511 aa)
GTF2E2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (289 aa)
LOC102176868WD_REPEATS_REGION domain-containing protein. (587 aa)
POLR3KDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
TAF1Transcription initiation factor TFIID subunit. (1882 aa)
ENSCHIP00000021995Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (239 aa)
POLIDNA polymerase iota. (751 aa)
ENSCHIP00000021672Uncharacterized protein. (209 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
RPAP2RNA polymerase II associated protein 2. (607 aa)
POLR1ERNA polymerase I subunit E. (419 aa)
GTF2A1LGeneral transcription factor IIA subunit 1 like. (402 aa)
RPRD1ARegulation of nuclear pre-mRNA domain containing 1A. (312 aa)
PGM1Phosphoglucomutase 1; Belongs to the phosphohexose mutase family. (580 aa)
ENSCHIP00000019473Uncharacterized protein. (248 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1703 aa)
RO60Ro60, Y RNA binding protein. (538 aa)
TAF8TATA-box binding protein associated factor 8. (310 aa)
POLR3GUncharacterized protein. (222 aa)
ENSCHIP00000018712Uncharacterized protein. (47 aa)
DHX57DExH-box helicase 57. (1347 aa)
ENSCHIP00000016839Uncharacterized protein. (240 aa)
POLA1DNA polymerase. (1468 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (714 aa)
ENSCHIP00000016318TFIIA_gamma_C domain-containing protein. (78 aa)
SUPT3HSPT3 homolog, SAGA and STAGA complex component. (373 aa)
PEPDPeptidase D. (493 aa)
GTF2A2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
ENSCHIP00000013506Uncharacterized protein. (117 aa)
POLR3FDNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (316 aa)
POLR3ERNA polymerase III subunit E. (703 aa)
ENSCHIP00000013021WD_REPEATS_REGION domain-containing protein. (324 aa)
POLR1BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1135 aa)
C22orf23Chromosome 22 open reading frame 23. (217 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (668 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
UPK3BL2Uncharacterized protein. (253 aa)
POLR3HRNA polymerase III subunit H. (204 aa)
POLRMTDNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1211 aa)
WDR47WD repeat domain 47. (919 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
POLR2KUncharacterized protein. (58 aa)
TAF4TATA-box binding protein associated factor 4. (1042 aa)
LOC102185505General transcription factor IIH subunit. (388 aa)
GTF2A1General transcription factor IIA subunit 1. (376 aa)
GTF2H3General transcription factor IIH subunit 3. (307 aa)
POLR3DRNA polymerase III subunit D. (398 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (546 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1173 aa)
PAF1Uncharacterized protein. (501 aa)
PEX2Peroxisomal biogenesis factor 2. (305 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
GTF2E1General transcription factor IIE subunit 1. (439 aa)
ENSCHIP00000007326WD_REPEATS_REGION domain-containing protein. (189 aa)
LOC102183623Uncharacterized protein. (261 aa)
ENSCHIP00000006342WD_REPEATS_REGION domain-containing protein. (578 aa)
RECQL5ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (991 aa)
ENSCHIP00000005370Uncharacterized protein. (121 aa)
SH3BP5LSH3 binding domain protein 5 like. (385 aa)
ENSCHIP00000005284Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (289 aa)
POLR2JRNA_pol_L_2 domain-containing protein. (136 aa)
LAP3Leucine aminopeptidase 3. (519 aa)
ENSCHIP00000003603Uncharacterized protein. (57 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
TAF3TATA-box binding protein associated factor 3. (921 aa)
POLR1CRNA polymerase I and III subunit C. (347 aa)
ENSCHIP00000001883DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (101 aa)
POLR2MRNA polymerase II subunit M. (370 aa)
ENSCHIP00000000518Uncharacterized protein. (242 aa)
POLR3ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1449 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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