STRINGSTRING
PRPF8 PRPF8 PDE6C PDE6C CD2BP2 CD2BP2 ENSCHIP00000008007 ENSCHIP00000008007 SNRNP200 SNRNP200 TXNL4A TXNL4A DDX23 DDX23
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PRPF8Pre-mRNA processing factor 8. (2335 aa)
PDE6CPhosphodiesterase. (845 aa)
CD2BP2CD2 cytoplasmic tail binding protein 2. (341 aa)
ENSCHIP00000008007Uncharacterized protein. (85 aa)
SNRNP200Small nuclear ribonucleoprotein U5 subunit 200. (2146 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
DDX23DEAD-box helicase 23. (820 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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