20 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PRIM1	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (401 aa)
	PPP2R3B	Protein phosphatase 2 regulatory subunit B''beta. (664 aa)
	RB1	RB transcriptional corepressor 1. (931 aa)
	ENSCHIP00000003440	Uncharacterized protein. (94 aa)
	PPP2CB	Serine/threonine-protein phosphatase. (309 aa)
	PPP2R3A	Protein phosphatase 2 regulatory subunit B''alpha. (1150 aa)
	ENSCHIP00000008753	Uncharacterized protein. (589 aa)
	LOC108637886	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform. (309 aa)
	FNBP4	Formin binding protein 4. (1017 aa)
	PPP2R3C	Protein phosphatase 2 regulatory subunit B''gamma. (453 aa)
	PPP4R4	Protein phosphatase 4 regulatory subunit 4. (874 aa)
	POLA1	DNA polymerase. (1468 aa)
	PPP4R1	Protein phosphatase 4 regulatory subunit 1. (922 aa)
	RELCH	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing. (1212 aa)
	PPP2R1B	Protein phosphatase 2 scaffold subunit Abeta. (615 aa)
	ENSCHIP00000024230	Serine/threonine-protein phosphatase. (303 aa)
	POLA2	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (603 aa)
	PPP2R1A	Protein phosphatase 2 scaffold subunit Aalpha. (598 aa)
	PPP2CA	Serine/threonine-protein phosphatase. (309 aa)
	PRIM2	Uncharacterized protein. (219 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCHIP00000003440	ENSCHIP00000008753	ENSCHIP00000003440	ENSCHIP00000008753	Uncharacterized protein.	Uncharacterized protein.	0.798
ENSCHIP00000003440	FNBP4	ENSCHIP00000003440	ENSCHIP00000010770	Uncharacterized protein.	Formin binding protein 4.	0.616
ENSCHIP00000003440	PPP2R1A	ENSCHIP00000003440	ENSCHIP00000027683	Uncharacterized protein.	Protein phosphatase 2 scaffold subunit Aalpha.	0.798
ENSCHIP00000003440	PPP2R1B	ENSCHIP00000003440	ENSCHIP00000021821	Uncharacterized protein.	Protein phosphatase 2 scaffold subunit Abeta.	0.747
ENSCHIP00000003440	PPP2R3A	ENSCHIP00000003440	ENSCHIP00000005890	Uncharacterized protein.	Protein phosphatase 2 regulatory subunit B''alpha.	0.599
ENSCHIP00000003440	PPP2R3B	ENSCHIP00000003440	ENSCHIP00000000256	Uncharacterized protein.	Protein phosphatase 2 regulatory subunit B''beta.	0.599
ENSCHIP00000003440	PPP2R3C	ENSCHIP00000003440	ENSCHIP00000013768	Uncharacterized protein.	Protein phosphatase 2 regulatory subunit B''gamma.	0.650
ENSCHIP00000003440	PPP4R1	ENSCHIP00000003440	ENSCHIP00000018069	Uncharacterized protein.	Protein phosphatase 4 regulatory subunit 1.	0.616
ENSCHIP00000003440	PPP4R4	ENSCHIP00000003440	ENSCHIP00000014327	Uncharacterized protein.	Protein phosphatase 4 regulatory subunit 4.	0.640
ENSCHIP00000003440	RELCH	ENSCHIP00000003440	ENSCHIP00000019194	Uncharacterized protein.	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.	0.616
ENSCHIP00000008753	ENSCHIP00000003440	ENSCHIP00000008753	ENSCHIP00000003440	Uncharacterized protein.	Uncharacterized protein.	0.798
ENSCHIP00000008753	ENSCHIP00000024230	ENSCHIP00000008753	ENSCHIP00000024230	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.847
ENSCHIP00000008753	LOC108637886	ENSCHIP00000008753	ENSCHIP00000009447	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform.	0.847
ENSCHIP00000008753	PPP2CA	ENSCHIP00000008753	ENSCHIP00000027969	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.927
ENSCHIP00000008753	PPP2CB	ENSCHIP00000008753	ENSCHIP00000004028	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.847
ENSCHIP00000008753	PPP2R3A	ENSCHIP00000008753	ENSCHIP00000005890	Uncharacterized protein.	Protein phosphatase 2 regulatory subunit B''alpha.	0.703
ENSCHIP00000008753	PPP2R3B	ENSCHIP00000008753	ENSCHIP00000000256	Uncharacterized protein.	Protein phosphatase 2 regulatory subunit B''beta.	0.703
ENSCHIP00000008753	PPP2R3C	ENSCHIP00000008753	ENSCHIP00000013768	Uncharacterized protein.	Protein phosphatase 2 regulatory subunit B''gamma.	0.660
ENSCHIP00000024230	ENSCHIP00000008753	ENSCHIP00000024230	ENSCHIP00000008753	Serine/threonine-protein phosphatase.	Uncharacterized protein.	0.847
ENSCHIP00000024230	FNBP4	ENSCHIP00000024230	ENSCHIP00000010770	Serine/threonine-protein phosphatase.	Formin binding protein 4.	0.616