STRINGSTRING
PXDN PXDN PCOLCE PCOLCE TLL2 TLL2 COL4A2 COL4A2 COL4A6 COL4A6 COL1A2 COL1A2 TLL1 TLL1 LOXL4 LOXL4 BMP1 BMP1 LOXL3 LOXL3 COL4A1 COL4A1 LOXL1 LOXL1 COL1A1 COL1A1 LOX LOX LOXL2 LOXL2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PXDNPeroxidasin. (1525 aa)
PCOLCEProcollagen C-endopeptidase enhancer. (451 aa)
TLL2Metalloendopeptidase. (1020 aa)
COL4A2Collagen type IV alpha 2 chain. (1607 aa)
COL4A6Collagen IV NC1 domain-containing protein. (170 aa)
COL1A2Collagen type I alpha 2 chain. (1128 aa)
TLL1Metalloendopeptidase. (1013 aa)
LOXL4Lysyl oxidase like 4. (757 aa)
BMP1Metalloendopeptidase. (988 aa)
LOXL3Lysyl oxidase like 3. (752 aa)
COL4A1Collagen type IV alpha 1 chain. (1608 aa)
LOXL1Lysyl oxidase like 1. (592 aa)
COL1A1Collagen type I alpha 1 chain. (1463 aa)
LOXLysyl oxidase. (418 aa)
LOXL2Lysyl oxidase like 2. (791 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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