STRINGSTRING
ENSCHIP00000015808 ENSCHIP00000015808 MRE11 MRE11 BARD1 BARD1 MUS81 MUS81 XRCC2 XRCC2 ENSCHIP00000031435 ENSCHIP00000031435 ENSCHIP00000031621 ENSCHIP00000031621 BRCA1 BRCA1 RAD51 RAD51 RMI2 RMI2 BRCA2 BRCA2 SLX1A SLX1A XRCC3 XRCC3 RAD51D RAD51D DNA2 DNA2 SPIDR SPIDR SLX4 SLX4 ATM ATM EME1 EME1 BRIP1 BRIP1 KAT5 KAT5 RAD51C RAD51C WRN WRN RAD51B RAD51B TOP3A TOP3A RAD51AP1 RAD51AP1 GEN1 GEN1 RBBP8 RBBP8 EXO1 EXO1 RMI1 RMI1 NBN NBN RECQL4 RECQL4 BLM BLM PALB2 PALB2 ENSCHIP00000003676 ENSCHIP00000003676 RAD50 RAD50
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSCHIP00000015808BRCT domain-containing protein. (262 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (724 aa)
BARD1BRCA1 associated RING domain 1. (775 aa)
MUS81MUS81 structure-specific endonuclease subunit. (552 aa)
XRCC2X-ray repair cross complementing 2. (280 aa)
ENSCHIP00000031435Uncharacterized protein. (77 aa)
ENSCHIP00000031621Uncharacterized protein. (159 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1843 aa)
RAD51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
RMI2Uncharacterized protein. (161 aa)
BRCA2BRCA2 DNA repair associated. (3405 aa)
SLX1AStructure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. Has a preference for 5'-flap structures, and promotes symmetrical cleavage of static and migrating Holliday junctions (HJs). Resolves HJs by generating two pairs of ligatable, nicked duplex products. (267 aa)
XRCC3DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. (341 aa)
RAD51DDNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents; Belongs to the RecA family. RAD51 subfamily. (338 aa)
DNA2DNA replication helicase/nuclease 2. (1062 aa)
SPIDRScaffold protein involved in DNA repair. (916 aa)
SLX4SLX4 structure-specific endonuclease subunit. (1752 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3058 aa)
EME1Essential meiotic structure-specific endonuclease 1. (580 aa)
BRIP1BRCA1 interacting protein C-terminal helicase 1. (1217 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (546 aa)
RAD51CRAD51 paralog C. (371 aa)
WRNWRN RecQ like helicase. (1405 aa)
RAD51BRAD51 paralog B. (270 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1002 aa)
RAD51AP1RAD51 associated protein 1. (326 aa)
GEN1GEN1 Holliday junction 5' flap endonuclease. (931 aa)
RBBP8RB binding protein 8, endonuclease. (889 aa)
EXO1Exonuclease 1. (835 aa)
RMI1RecQ mediated genome instability 1. (624 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (754 aa)
RECQL4RecQ like helicase 4. (1176 aa)
BLMBLM RecQ like helicase. (1429 aa)
PALB2Partner and localizer of BRCA2. (1194 aa)
ENSCHIP00000003676RECA_2 domain-containing protein. (278 aa)
RAD50Zinc-hook domain-containing protein. (1332 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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