STRINGSTRING
SFN SFN ENSCHIP00000005897 ENSCHIP00000005897 H2BC6 H2BC6 LOC108633414 LOC108633414 ENSCHIP00000006197 ENSCHIP00000006197 TP53BP1 TP53BP1 BLM BLM LOC106503502 LOC106503502 LOC108636047 LOC108636047 ATM ATM ABRAXAS1 ABRAXAS1 ENSCHIP00000016214 ENSCHIP00000016214 ENSCHIP00000015808 ENSCHIP00000015808 CCNB1 CCNB1 HERC2 HERC2 YWHAH YWHAH BRIP1 BRIP1 RAD9B RAD9B YWHAB YWHAB KAT5 KAT5 PIAS4 PIAS4 ENSCHIP00000014234 ENSCHIP00000014234 SLF1 SLF1 RAD1 RAD1 WRN WRN MDC1 MDC1 RAD9A RAD9A TOP3A TOP3A UBE2V2 UBE2V2 RHNO1 RHNO1 LOC102172676 LOC102172676 MEIOB MEIOB ENSCHIP00000011074 ENSCHIP00000011074 LOC106503503 LOC106503503 LOC102185323 LOC102185323 H2BC3 H2BC3 RECQL4 RECQL4 NBN NBN H2BC11 H2BC11 ENSCHIP00000007999 ENSCHIP00000007999 ENSCHIP00000004152 ENSCHIP00000004152 LOC102180587 LOC102180587 ENSCHIP00000008488 ENSCHIP00000008488 ENSCHIP00000009147 ENSCHIP00000009147 ENSCHIP00000009200 ENSCHIP00000009200 ENSCHIP00000009386 ENSCHIP00000009386 ENSCHIP00000009605 ENSCHIP00000009605 H2BC15 H2BC15 ENSCHIP00000004205 ENSCHIP00000004205 ENSCHIP00000004308 ENSCHIP00000004308 ENSCHIP00000004381 ENSCHIP00000004381 ENSCHIP00000004431 ENSCHIP00000004431 LOC102179187 LOC102179187 H2BC1 H2BC1 ENSCHIP00000004577 ENSCHIP00000004577 RFC2 RFC2 H2BU1 H2BU1 ENSCHIP00000005277 ENSCHIP00000005277 NSD2 NSD2 LOC102172954 LOC102172954 LOC102180845 LOC102180845 YWHAQ YWHAQ RFC3 RFC3 H2BE1 H2BE1 RMI1 RMI1 LOC102184017 LOC102184017 RBBP8 RBBP8 EXO1 EXO1 H2BC21 H2BC21 RPA1 RPA1 ENSCHIP00000031621 ENSCHIP00000031621 ENSCHIP00000031435 ENSCHIP00000031435 ENSCHIP00000031302 ENSCHIP00000031302 YWHAG YWHAG ENSCHIP00000030705 ENSCHIP00000030705 CHEK1 CHEK1 ENSCHIP00000005753 ENSCHIP00000005753 ENSCHIP00000033267 ENSCHIP00000033267 BRCA1 BRCA1 TOPBP1 TOPBP1 TP53 TP53 BABAM1 BABAM1 CDC25C CDC25C LOC102186674 LOC102186674 ATRIP ATRIP HUS1 HUS1 CHEK2 CHEK2 RPA3 RPA3 RNF168 RNF168 YWHAE YWHAE ENSCHIP00000027126 ENSCHIP00000027126 ENSCHIP00000027031 ENSCHIP00000027031 UIMC1 UIMC1 ENSCHIP00000026297 ENSCHIP00000026297 ENSCHIP00000025754 ENSCHIP00000025754 ATR ATR EXD2 EXD2 BARD1 BARD1 MRE11 MRE11 RMI2 RMI2 ENSCHIP00000024011 ENSCHIP00000024011 ENSCHIP00000023759 ENSCHIP00000023759 RFC4 RFC4 RAD17 RAD17 YWHAZ YWHAZ TDRD3 TDRD3 DNA2 DNA2 RPA2 RPA2 WEE2 WEE2 BRCC3 BRCC3 WEE1 WEE1 RFC5 RFC5 ENSCHIP00000003806 ENSCHIP00000003806 LOC102172226 LOC102172226 H2BC18 H2BC18 LOC102182181 LOC102182181 RNF8 RNF8 LOC102183280 LOC102183280 ENSCHIP00000003174 ENSCHIP00000003174 RAD50 RAD50 LOC102175243 LOC102175243 LOC102181912 LOC102181912 RNF169 RNF169 ENSCHIP00000002654 ENSCHIP00000002654 ENSCHIP00000001833 ENSCHIP00000001833 BABAM2 BABAM2 LOC102180307 LOC102180307 ENSCHIP00000001380 ENSCHIP00000001380 ENSCHIP00000001154 ENSCHIP00000001154 H2BC12 H2BC12 ENSCHIP00000000954 ENSCHIP00000000954 ENSCHIP00000000835 ENSCHIP00000000835 ENSCHIP00000000787 ENSCHIP00000000787 CDK1 CDK1 LOC102176379 LOC102176379 ENSCHIP00000000047 ENSCHIP00000000047
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SFNStratifin; Belongs to the 14-3-3 family. (248 aa)
ENSCHIP00000005897Reverse transcriptase domain-containing protein. (269 aa)
H2BC6Histone H2B type 1. (126 aa)
LOC108633414Histone H2B type 1. (126 aa)
ENSCHIP00000006197Reverse transcriptase domain-containing protein. (851 aa)
TP53BP1Tumor protein p53 binding protein 1. (1966 aa)
BLMBLM RecQ like helicase. (1429 aa)
LOC106503502Histone H4. (103 aa)
LOC108636047Histone H4. (103 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3058 aa)
ABRAXAS1Abraxas 1, BRCA1 A complex subunit. (410 aa)
ENSCHIP0000001621414_3_3 domain-containing protein; Belongs to the 14-3-3 family. (217 aa)
ENSCHIP00000015808BRCT domain-containing protein. (262 aa)
CCNB1Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (427 aa)
HERC2HECT and RLD domain containing E3 ubiquitin protein ligase 2. (4836 aa)
YWHAHTyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta; Belongs to the 14-3-3 family. (246 aa)
BRIP1BRCA1 interacting protein C-terminal helicase 1. (1217 aa)
RAD9BCell cycle checkpoint control protein; Belongs to the rad9 family. (428 aa)
YWHABTyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta; Belongs to the 14-3-3 family. (246 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (546 aa)
PIAS4Protein inhibitor of activated STAT 4. (513 aa)
ENSCHIP0000001423414_3_3 domain-containing protein; Belongs to the 14-3-3 family. (256 aa)
SLF1SMC5-SMC6 complex localization factor 1. (1056 aa)
RAD1Uncharacterized protein. (279 aa)
WRNWRN RecQ like helicase. (1405 aa)
MDC1Mediator of DNA damage checkpoint 1. (1914 aa)
RAD9ACell cycle checkpoint control protein; Belongs to the rad9 family. (395 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1002 aa)
UBE2V2Ubiquitin conjugating enzyme E2 V2. (148 aa)
RHNO1RAD9-HUS1-RAD1 interacting nuclear orphan 1. (241 aa)
LOC102172676Histone H2B type 2-E-like. (126 aa)
MEIOBMeiosis specific with OB-fold. (467 aa)
ENSCHIP00000011074annotation not available (103 aa)
LOC106503503Histone H4. (103 aa)
LOC102185323Histone H2B type 1. (126 aa)
H2BC3Histone H2B; Belongs to the histone H2B family. (126 aa)
RECQL4RecQ like helicase 4. (1176 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (754 aa)
H2BC11Histone H2B; Belongs to the histone H2B family. (126 aa)
ENSCHIP00000007999Uncharacterized protein. (233 aa)
ENSCHIP00000004152annotation not available (103 aa)
LOC102180587Histone H2B type 1. (126 aa)
ENSCHIP00000008488annotation not available (103 aa)
ENSCHIP00000009147annotation not available (103 aa)
ENSCHIP00000009200annotation not available (103 aa)
ENSCHIP00000009386Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (102 aa)
ENSCHIP00000009605Uncharacterized protein. (61 aa)
H2BC15Histone H2B; Belongs to the histone H2B family. (126 aa)
ENSCHIP00000004205Reverse transcriptase domain-containing protein. (997 aa)
ENSCHIP00000004308annotation not available (103 aa)
ENSCHIP00000004381Reverse transcriptase domain-containing protein. (960 aa)
ENSCHIP0000000443114_3_3 domain-containing protein; Belongs to the 14-3-3 family. (245 aa)
LOC102179187Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BC1Histone H2B; Belongs to the histone H2B family. (127 aa)
ENSCHIP00000004577Reverse transcriptase domain-containing protein. (738 aa)
RFC2Replication factor C subunit 2. (352 aa)
H2BU1Histone H2B; Belongs to the histone H2B family. (126 aa)
ENSCHIP00000005277annotation not available (103 aa)
NSD2Nuclear receptor binding SET domain protein 2. (1365 aa)
LOC102172954Histone H4. (103 aa)
LOC102180845Histone H2B type 1. (126 aa)
YWHAQ14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (245 aa)
RFC3Replication factor C subunit 3. (356 aa)
H2BE1Histone H2B; Belongs to the histone H2B family. (122 aa)
RMI1RecQ mediated genome instability 1. (624 aa)
LOC102184017Histone H2B type 1. (126 aa)
RBBP8RB binding protein 8, endonuclease. (889 aa)
EXO1Exonuclease 1. (835 aa)
H2BC21Histone H2B; Belongs to the histone H2B family. (126 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (617 aa)
ENSCHIP00000031621Uncharacterized protein. (159 aa)
ENSCHIP00000031435Uncharacterized protein. (77 aa)
ENSCHIP00000031302UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (155 aa)
YWHAGTyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma; Belongs to the 14-3-3 family. (247 aa)
ENSCHIP0000003070514_3_3 domain-containing protein; Belongs to the 14-3-3 family. (206 aa)
CHEK1Checkpoint kinase 1; Belongs to the protein kinase superfamily. (476 aa)
ENSCHIP00000005753annotation not available (103 aa)
ENSCHIP00000033267Reverse transcriptase domain-containing protein. (241 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1843 aa)
TOPBP1DNA topoisomerase II binding protein 1. (1521 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (382 aa)
BABAM1BRISC and BRCA1 A complex member 1. (332 aa)
CDC25CCell division cycle 25C. (452 aa)
LOC10218667414_3_3 domain-containing protein; Belongs to the 14-3-3 family. (235 aa)
ATRIPATR interacting protein. (791 aa)
HUS1Checkpoint protein; Belongs to the HUS1 family. (280 aa)
CHEK2Checkpoint kinase 2. (534 aa)
RPA3Uncharacterized protein. (121 aa)
RNF168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and H2AX and amplifies the RNF8-dependent H2A ubiquitination, promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recruitment of TP53BP1 and BRCA1. Also recrui [...] (573 aa)
YWHAE14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (243 aa)
ENSCHIP00000027126UBIQUITIN_CONJUGAT_2 domain-containing protein. (132 aa)
ENSCHIP0000002703114_3_3 domain-containing protein; Belongs to the 14-3-3 family. (240 aa)
UIMC1Ubiquitin interaction motif containing 1. (795 aa)
ENSCHIP00000026297Histone domain-containing protein; Belongs to the histone H2B family. (112 aa)
ENSCHIP00000025754Uncharacterized protein; Belongs to the cyclin family. (386 aa)
ATRATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2644 aa)
EXD2Exonuclease 3'-5' domain containing 2. (642 aa)
BARD1BRCA1 associated RING domain 1. (775 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (724 aa)
RMI2Uncharacterized protein. (161 aa)
ENSCHIP0000002401114_3_3 domain-containing protein. (93 aa)
ENSCHIP00000023759Uncharacterized protein; Belongs to the cyclin family. (388 aa)
RFC4Replication factor C subunit 4. (364 aa)
RAD17RAD17 checkpoint clamp loader component. (709 aa)
YWHAZTyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta polypeptide; Belongs to the 14-3-3 family. (245 aa)
TDRD3Tudor domain containing 3. (762 aa)
DNA2DNA replication helicase/nuclease 2. (1062 aa)
RPA2Replication protein A2. (270 aa)
WEE2Wee1-like protein kinase. (566 aa)
BRCC3MPN domain-containing protein. (288 aa)
WEE1Wee1-like protein kinase. (645 aa)
RFC5Replication factor C subunit 5. (339 aa)
ENSCHIP00000003806Reverse transcriptase domain-containing protein. (310 aa)
LOC102172226Histone domain-containing protein; Belongs to the histone H2B family. (126 aa)
H2BC18Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102182181Histone H2B type 1. (126 aa)
RNF8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (504 aa)
LOC102183280Histone H2B type 1. (126 aa)
ENSCHIP00000003174Endo/exonuclease/phosphatase domain-containing protein. (426 aa)
RAD50Zinc-hook domain-containing protein. (1332 aa)
LOC102175243Histone domain-containing protein; Belongs to the histone H2B family. (122 aa)
LOC102181912Histone H2B; Belongs to the histone H2B family. (126 aa)
RNF169Ring finger protein 169. (708 aa)
ENSCHIP00000002654Uncharacterized protein. (121 aa)
ENSCHIP00000001833Reverse transcriptase domain-containing protein. (304 aa)
BABAM2BRISC and BRCA1 A complex member 2. (383 aa)
LOC102180307Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
ENSCHIP00000001380Reverse transcriptase domain-containing protein. (704 aa)
ENSCHIP00000001154Reverse transcriptase domain-containing protein. (730 aa)
H2BC12Histone H2B; Belongs to the histone H2B family. (126 aa)
ENSCHIP00000000954Reverse transcriptase domain-containing protein. (679 aa)
ENSCHIP00000000835Reverse transcriptase domain-containing protein. (303 aa)
ENSCHIP0000000078714_3_3 domain-containing protein; Belongs to the 14-3-3 family. (245 aa)
CDK1Cyclin dependent kinase 1; Belongs to the protein kinase superfamily. (312 aa)
LOC102176379Wee1-like protein kinase. (549 aa)
ENSCHIP00000000047RING-type domain-containing protein. (101 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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