STRINGSTRING
LOC102181016 LOC102181016 LOC102176799 LOC102176799 GAPDHS GAPDHS CD4 CD4 COL4A2 COL4A2 CTSH CTSH COL1A2 COL1A2 CD19 CD19 CD68 CD68 CTSS CTSS GAPDH GAPDH COL4A1 COL4A1 FBN1 FBN1 COL1A1 COL1A1 MMP13 MMP13 DCN DCN FBLN5 FBLN5 PXDN PXDN RAB3D RAB3D FBN2 FBN2 MMP16 MMP16
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102181016Gp_dh_N domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (318 aa)
LOC102176799Glyceraldehyde-3-phosphate dehydrogenase. (333 aa)
GAPDHSGlyceraldehyde-3-phosphate dehydrogenase. (385 aa)
CD4CD4 molecule. (455 aa)
COL4A2Collagen type IV alpha 2 chain. (1607 aa)
CTSHCathepsin H; Belongs to the peptidase C1 family. (335 aa)
COL1A2Collagen type I alpha 2 chain. (1128 aa)
CD19CD19 molecule. (561 aa)
CD68CD68 molecule. (335 aa)
CTSSCathepsin S; Belongs to the peptidase C1 family. (331 aa)
GAPDHGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
COL4A1Collagen type IV alpha 1 chain. (1608 aa)
FBN1Fibrillin 1. (2860 aa)
COL1A1Collagen type I alpha 1 chain. (1463 aa)
MMP13Matrix metallopeptidase 13. (472 aa)
DCNDecorin; May affect the rate of fibrils formation. (360 aa)
FBLN5Fibulin 5. (448 aa)
PXDNPeroxidasin. (1525 aa)
RAB3DRAB3D, member RAS oncogene family. (219 aa)
FBN2Fibrillin 2. (2900 aa)
MMP16Matrix metallopeptidase 16. (607 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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