STRINGSTRING
CHD4 CHD4 GAPDH GAPDH THRAP3 THRAP3 SFPQ SFPQ PARP2 PARP2 HNRNPA1 HNRNPA1 RAD51 RAD51 NONO NONO HNRNPU HNRNPU RRM2 RRM2 RBMX RBMX APLF APLF PARG PARG XRCC4 XRCC4 PSPC1 PSPC1 PARP1 PARP1 RRM1 RRM1 XRCC1 XRCC1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CHD4Uncharacterized protein. (1905 aa)
GAPDHGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
THRAP3Thyroid hormone receptor associated protein 3. (979 aa)
SFPQSplicing factor proline and glutamine rich. (711 aa)
PARP2Poly [ADP-ribose] polymerase. (533 aa)
HNRNPA1Uncharacterized protein. (320 aa)
RAD51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
NONONon-POU domain containing octamer binding. (470 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (806 aa)
RRM2Ribonucleotide reductase regulatory subunit M2. (389 aa)
RBMXRRM domain-containing protein. (395 aa)
APLFAprataxin and PNKP like factor. (480 aa)
PARGPoly(ADP-ribose) glycohydrolase. (972 aa)
XRCC4X-ray repair cross complementing 4. (332 aa)
PSPC1Paraspeckle component 1. (520 aa)
PARP1Poly [ADP-ribose] polymerase. (1020 aa)
RRM1Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (791 aa)
XRCC1X-ray repair cross complementing 1. (632 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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