11 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SUMO2	Small ubiquitin-related modifier. (95 aa)
	SUMO1	Small ubiquitin-related modifier. (101 aa)
	SUMO4	Small ubiquitin-related modifier. (95 aa)
	RANBP2	RAN binding protein 2. (3077 aa)
	FANCM	FA complementation group M. (2043 aa)
	SUMO3	Small ubiquitin-related modifier. (104 aa)
	EME1	Essential meiotic structure-specific endonuclease 1. (580 aa)
	FBH1	F-box DNA helicase 1. (1048 aa)
	BRCA2	BRCA2 DNA repair associated. (3405 aa)
	MUS81	MUS81 structure-specific endonuclease subunit. (552 aa)
	RECQL	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (649 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BRCA2	EME1	ENSCHIP00000024039	ENSCHIP00000015587	BRCA2 DNA repair associated.	Essential meiotic structure-specific endonuclease 1.	0.706
BRCA2	FANCM	ENSCHIP00000024039	ENSCHIP00000013958	BRCA2 DNA repair associated.	FA complementation group M.	0.898
BRCA2	FBH1	ENSCHIP00000024039	ENSCHIP00000015825	BRCA2 DNA repair associated.	F-box DNA helicase 1.	0.680
BRCA2	MUS81	ENSCHIP00000024039	ENSCHIP00000028466	BRCA2 DNA repair associated.	MUS81 structure-specific endonuclease subunit.	0.915
BRCA2	RECQL	ENSCHIP00000024039	ENSCHIP00000029033	BRCA2 DNA repair associated.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.517
EME1	BRCA2	ENSCHIP00000015587	ENSCHIP00000024039	Essential meiotic structure-specific endonuclease 1.	BRCA2 DNA repair associated.	0.706
EME1	FANCM	ENSCHIP00000015587	ENSCHIP00000013958	Essential meiotic structure-specific endonuclease 1.	FA complementation group M.	0.718
EME1	MUS81	ENSCHIP00000015587	ENSCHIP00000028466	Essential meiotic structure-specific endonuclease 1.	MUS81 structure-specific endonuclease subunit.	0.999
FANCM	BRCA2	ENSCHIP00000013958	ENSCHIP00000024039	FA complementation group M.	BRCA2 DNA repair associated.	0.898
FANCM	EME1	ENSCHIP00000013958	ENSCHIP00000015587	FA complementation group M.	Essential meiotic structure-specific endonuclease 1.	0.718
FANCM	FBH1	ENSCHIP00000013958	ENSCHIP00000015825	FA complementation group M.	F-box DNA helicase 1.	0.986
FANCM	MUS81	ENSCHIP00000013958	ENSCHIP00000028466	FA complementation group M.	MUS81 structure-specific endonuclease subunit.	0.998
FANCM	RECQL	ENSCHIP00000013958	ENSCHIP00000029033	FA complementation group M.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.496
FBH1	BRCA2	ENSCHIP00000015825	ENSCHIP00000024039	F-box DNA helicase 1.	BRCA2 DNA repair associated.	0.680
FBH1	FANCM	ENSCHIP00000015825	ENSCHIP00000013958	F-box DNA helicase 1.	FA complementation group M.	0.986
FBH1	MUS81	ENSCHIP00000015825	ENSCHIP00000028466	F-box DNA helicase 1.	MUS81 structure-specific endonuclease subunit.	0.918
FBH1	SUMO1	ENSCHIP00000015825	ENSCHIP00000004495	F-box DNA helicase 1.	Small ubiquitin-related modifier.	0.729
FBH1	SUMO2	ENSCHIP00000015825	ENSCHIP00000032566	F-box DNA helicase 1.	Small ubiquitin-related modifier.	0.760
FBH1	SUMO3	ENSCHIP00000015825	ENSCHIP00000015197	F-box DNA helicase 1.	Small ubiquitin-related modifier.	0.734
FBH1	SUMO4	ENSCHIP00000015825	ENSCHIP00000006981	F-box DNA helicase 1.	Small ubiquitin-related modifier.	0.736