STRINGSTRING
YAP1 YAP1 VCL VCL HOXB6 HOXB6 RGS10 RGS10 IL7 IL7 RAG1 RAG1 CTCF CTCF TBX19 TBX19 ITGA5 ITGA5 AMOTL2 AMOTL2 LMO2 LMO2 TEAD1 TEAD1 HOXB8 HOXB8 CD79B CD79B IRF4 IRF4 BLNK BLNK HOXB7 HOXB7 PAX5 PAX5 FOXO1 FOXO1 PLXNB1 PLXNB1 BCR BCR IL7R IL7R ABL1 ABL1 HOXB5 HOXB5 CD19 CD19 EBF1 EBF1 MED1 MED1 CTNND1 CTNND1 LHX2 LHX2 TEAD2 TEAD2 CCND3 CCND3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
YAP1Yes associated protein 1. (503 aa)
VCLVinculin. (1134 aa)
HOXB6Homeobox B6. (224 aa)
RGS10Regulator of G protein signaling 10. (181 aa)
IL7Interleukin 7. (181 aa)
RAG1V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] (1043 aa)
CTCFCCCTC-binding factor. (727 aa)
TBX19T-box transcription factor 19. (446 aa)
ITGA5Integrin subunit alpha 5; Belongs to the integrin alpha chain family. (1100 aa)
AMOTL2Angiomotin like 2. (767 aa)
LMO2LIM domain only 2. (224 aa)
TEAD1TEA domain transcription factor 1. (436 aa)
HOXB8Homeobox B8. (243 aa)
CD79BCD79b molecule. (221 aa)
IRF4Interferon regulatory factor 4. (450 aa)
BLNKB cell linker. (384 aa)
HOXB7Homeobox B7. (217 aa)
PAX5Paired box 5. (392 aa)
FOXO1Forkhead box O1. (668 aa)
PLXNB1Plexin B1. (2140 aa)
BCRBCR activator of RhoGEF and GTPase. (1130 aa)
IL7RInterleukin 7 receptor. (459 aa)
ABL1Tyrosine-protein kinase. (1151 aa)
HOXB5Homeobox B5. (269 aa)
CD19CD19 molecule. (561 aa)
EBF1EBF transcription factor 1. (490 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1577 aa)
CTNND1Catenin delta 1. (939 aa)
LHX2Uncharacterized protein. (422 aa)
TEAD2TEA domain transcription factor 2. (448 aa)
CCND3Cyclin D3; Belongs to the cyclin family. (292 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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