STRINGSTRING
BRCA2 BRCA2 POLE POLE POLD2 POLD2 MCM5 MCM5 ATRX ATRX PCNA PCNA ATM ATM POLA1 POLA1 MCM4 MCM4 POLD1 POLD1 POLE3 POLE3 RAD17 RAD17 GAPDH GAPDH REV3L REV3L PRIM1 PRIM1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BRCA2BRCA2 DNA repair associated. (3405 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2281 aa)
POLD2DNA polymerase delta 2, accessory subunit. (469 aa)
MCM5DNA helicase; Belongs to the MCM family. (734 aa)
ATRXATRX chromatin remodeler. (2105 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3058 aa)
POLA1DNA polymerase. (1468 aa)
MCM4DNA helicase; Belongs to the MCM family. (851 aa)
POLD1DNA polymerase. (1115 aa)
POLE3CBFD_NFYB_HMF domain-containing protein. (147 aa)
RAD17RAD17 checkpoint clamp loader component. (709 aa)
GAPDHGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
REV3LREV3 like, DNA directed polymerase zeta catalytic subunit. (3134 aa)
PRIM1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (401 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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