33 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HOXA10	Homeobox A10. (413 aa)
	MEIS1	Meis homeobox 1. (465 aa)
	ZIC1	Zic family member 1. (447 aa)
	ALDH1A2	Aldehyde dehydrogenase 1 family member A2; Belongs to the aldehyde dehydrogenase family. (518 aa)
	HOXA9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (279 aa)
	HOXC10	Homeobox C10. (342 aa)
	ZIC5	Zic family member 5. (663 aa)
	EPHA5	EPH receptor A5. (1031 aa)
	SP8	Sp8 transcription factor. (486 aa)
	SOX2	HMG box domain-containing protein. (320 aa)
	TBX6	T-box transcription factor 6. (437 aa)
	EOMES	Eomesodermin. (701 aa)
	ZIC2	Zic family member 2. (528 aa)
	HOXD9	Homeobox D9. (351 aa)
	WNT3A	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (363 aa)
	GRSF1	G-rich RNA sequence binding factor 1. (480 aa)
	DLL1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (724 aa)
	CITED1	Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1. (247 aa)
	SOX1	SRY-box transcription factor 1. (313 aa)
	SEMA6A	Semaphorin 6A; Belongs to the semaphorin family. (1046 aa)
	HOXB1	Homeobox B1. (302 aa)
	MIXL1	Mix paired-like homeobox. (233 aa)
	FGF8	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (255 aa)
	FST	Uncharacterized protein. (344 aa)
	CDX4	Caudal type homeobox 4. (283 aa)
	MEIS2	Meis homeobox 2. (470 aa)
	ACTB	Uncharacterized protein. (375 aa)
	IRX3	Iroquois homeobox 3. (503 aa)
	EPHA2	EPH receptor A2. (975 aa)
	CDX2	Caudal type homeobox 2. (306 aa)
	MEOX1	Mesenchyme homeobox 1. (254 aa)
	HOXC9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (260 aa)
	CYP26A1	Cytochrome P450 family 26 subfamily A member 1; Belongs to the cytochrome P450 family. (497 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTB	CDX2	ENSCHIP00000011080	ENSCHIP00000029734	Uncharacterized protein.	Caudal type homeobox 2.	0.520
ACTB	DLL1	ENSCHIP00000011080	ENSCHIP00000023056	Uncharacterized protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.564
ACTB	EPHA2	ENSCHIP00000011080	ENSCHIP00000014598	Uncharacterized protein.	EPH receptor A2.	0.584
ACTB	FGF8	ENSCHIP00000011080	ENSCHIP00000016903	Uncharacterized protein.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.588
ACTB	SOX1	ENSCHIP00000011080	ENSCHIP00000019659	Uncharacterized protein.	SRY-box transcription factor 1.	0.455
ACTB	SOX2	ENSCHIP00000011080	ENSCHIP00000007702	Uncharacterized protein.	HMG box domain-containing protein.	0.789
ACTB	WNT3A	ENSCHIP00000011080	ENSCHIP00000015590	Uncharacterized protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.720
ALDH1A2	CDX4	ENSCHIP00000031730	ENSCHIP00000013361	Aldehyde dehydrogenase 1 family member A2; Belongs to the aldehyde dehydrogenase family.	Caudal type homeobox 4.	0.474
ALDH1A2	CYP26A1	ENSCHIP00000031730	ENSCHIP00000016557	Aldehyde dehydrogenase 1 family member A2; Belongs to the aldehyde dehydrogenase family.	Cytochrome P450 family 26 subfamily A member 1; Belongs to the cytochrome P450 family.	0.960
CDX2	ACTB	ENSCHIP00000029734	ENSCHIP00000011080	Caudal type homeobox 2.	Uncharacterized protein.	0.520
CDX2	EOMES	ENSCHIP00000029734	ENSCHIP00000029718	Caudal type homeobox 2.	Eomesodermin.	0.799
CDX2	FGF8	ENSCHIP00000029734	ENSCHIP00000016903	Caudal type homeobox 2.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.414
CDX2	MIXL1	ENSCHIP00000029734	ENSCHIP00000018035	Caudal type homeobox 2.	Mix paired-like homeobox.	0.583
CDX2	SOX1	ENSCHIP00000029734	ENSCHIP00000019659	Caudal type homeobox 2.	SRY-box transcription factor 1.	0.585
CDX2	SOX2	ENSCHIP00000029734	ENSCHIP00000007702	Caudal type homeobox 2.	HMG box domain-containing protein.	0.793
CDX2	TBX6	ENSCHIP00000029734	ENSCHIP00000010988	Caudal type homeobox 2.	T-box transcription factor 6.	0.629
CDX2	WNT3A	ENSCHIP00000029734	ENSCHIP00000015590	Caudal type homeobox 2.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.704
CDX4	ALDH1A2	ENSCHIP00000013361	ENSCHIP00000031730	Caudal type homeobox 4.	Aldehyde dehydrogenase 1 family member A2; Belongs to the aldehyde dehydrogenase family.	0.474
CDX4	HOXA10	ENSCHIP00000013361	ENSCHIP00000013381	Caudal type homeobox 4.	Homeobox A10.	0.475
CDX4	MIXL1	ENSCHIP00000013361	ENSCHIP00000018035	Caudal type homeobox 4.	Mix paired-like homeobox.	0.500