STRINGSTRING
RAD52 RAD52 BRCA1 BRCA1 FANCD2 FANCD2 RECQL RECQL GAPDH GAPDH RNASEH1 RNASEH1 LOC102189503 LOC102189503 BRCA2 BRCA2 ATM ATM FANCM FANCM WRN WRN PIF1 PIF1 RNASEH2A RNASEH2A RMI1 RMI1 ENSCHIP00000009386 ENSCHIP00000009386 LOC102169981 LOC102169981 LOC102171353 LOC102171353 LOC106503503 LOC106503503 LOC108636047 LOC108636047 LOC108633916 LOC108633916 LOC106503502 LOC106503502 LOC106503499 LOC106503499 PALB2 PALB2 LOC102180554 LOC102180554 RECQL5 RECQL5 LOC102191748 LOC102191748 LOC102185882 LOC102185882 LOC102180307 LOC102180307 LOC108633554 LOC108633554 LOC102182848 LOC102182848 LOC108636012 LOC108636012 H3-4 H3-4 LOC108634231 LOC108634231 LOC102172954 LOC102172954
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RAD52RAD52 homolog, DNA repair protein. (416 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1843 aa)
FANCD2FA complementation group D2. (1423 aa)
RECQLATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (649 aa)
GAPDHGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
RNASEH1Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (285 aa)
LOC102189503Histone H3; Belongs to the histone H3 family. (136 aa)
BRCA2BRCA2 DNA repair associated. (3405 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3058 aa)
FANCMFA complementation group M. (2043 aa)
WRNWRN RecQ like helicase. (1405 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. Efficiently unwinds G-quadruplex (G4) DNA structures and forked RNA-DNA hybrids. Resolves G4 structures, preventing replication pausing and double-strand breaks (DSBs) at G4 motifs. Involved in the maintenance of telomeric DNA. Inhibits telomere elongation, de novo telomere formation and telomere addition to DSBs via catalytic inhibition of telomerase. Reduces the processivity of telomerase by displacing active telomerase from DNA [...] (649 aa)
RNASEH2ARibonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (301 aa)
RMI1RecQ mediated genome instability 1. (624 aa)
ENSCHIP00000009386Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (102 aa)
LOC102169981Histone domain-containing protein. (136 aa)
LOC102171353Histone H3; Belongs to the histone H3 family. (136 aa)
LOC106503503Histone H4. (103 aa)
LOC108636047Histone H4. (103 aa)
LOC108633916Histone H3; Belongs to the histone H3 family. (136 aa)
LOC106503502Histone H4. (103 aa)
LOC106503499Histone H3; Belongs to the histone H3 family. (136 aa)
PALB2Partner and localizer of BRCA2. (1194 aa)
LOC102180554Histone H3; Belongs to the histone H3 family. (136 aa)
RECQL5ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (991 aa)
LOC102191748Histone domain-containing protein. (136 aa)
LOC102185882Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102180307Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC108633554Histone domain-containing protein. (136 aa)
LOC102182848Histone H3; Belongs to the histone H3 family. (136 aa)
LOC108636012Histone H3; Belongs to the histone H3 family. (136 aa)
H3-4Histone H3; Belongs to the histone H3 family. (136 aa)
LOC108634231Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102172954Histone H4. (103 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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