STRINGSTRING
U2AF2 U2AF2 SF1 SF1 LOC108636012 LOC108636012 H3-4 H3-4 LOC108634231 LOC108634231 LOC102180554 LOC102180554 LOC106503499 LOC106503499 LOC108633916 LOC108633916 LOC102171353 LOC102171353 LOC102169981 LOC102169981 U2AF1 U2AF1 ACTB ACTB SLU7 SLU7 CCNA1 CCNA1 SF3B1 SF3B1 CCNB1 CCNB1 CDC40 CDC40 CCNA2 CCNA2 SYF2 SYF2 LOC102189503 LOC102189503 TP53 TP53 LOC102191748 LOC102191748 LOC102185882 LOC102185882 LOC108633554 LOC108633554 LOC102182848 LOC102182848
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (426 aa)
SF1Splicing factor 1. (639 aa)
LOC108636012Histone H3; Belongs to the histone H3 family. (136 aa)
H3-4Histone H3; Belongs to the histone H3 family. (136 aa)
LOC108634231Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102180554Histone H3; Belongs to the histone H3 family. (136 aa)
LOC106503499Histone H3; Belongs to the histone H3 family. (136 aa)
LOC108633916Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102171353Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102169981Histone domain-containing protein. (136 aa)
U2AF1Uncharacterized protein. (237 aa)
ACTBUncharacterized protein. (375 aa)
SLU7SLU7 homolog, splicing factor. (586 aa)
CCNA1Cyclin A1; Belongs to the cyclin family. (421 aa)
SF3B1Splicing factor 3b subunit 1. (1304 aa)
CCNB1Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (427 aa)
CDC40Cell division cycle 40. (592 aa)
CCNA2Cyclin A2; Belongs to the cyclin family. (430 aa)
SYF2SYF2 pre-mRNA splicing factor. (243 aa)
LOC102189503Histone H3; Belongs to the histone H3 family. (136 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (382 aa)
LOC102191748Histone domain-containing protein. (136 aa)
LOC102185882Histone H3; Belongs to the histone H3 family. (136 aa)
LOC108633554Histone domain-containing protein. (136 aa)
LOC102182848Histone H3; Belongs to the histone H3 family. (136 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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