11 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACTB	Uncharacterized protein. (375 aa)
	MEIS2	Meis homeobox 2. (470 aa)
	SERPINE3	Serpin family E member 3; Belongs to the serpin family. (401 aa)
	ROCK1	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1354 aa)
	SERPINE2	Serpin family E member 2; Belongs to the serpin family. (397 aa)
	MEIS1	Meis homeobox 1. (465 aa)
	AXIN2	Axin 2. (844 aa)
	AR	Androgen receptor. (891 aa)
	RPL13A	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family. (203 aa)
	SNAI2	Snail family transcriptional repressor 2. (268 aa)
	HOXB13	Homeobox B13. (285 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTB	AR	ENSCHIP00000011080	ENSCHIP00000024342	Uncharacterized protein.	Androgen receptor.	0.792
ACTB	AXIN2	ENSCHIP00000011080	ENSCHIP00000022676	Uncharacterized protein.	Axin 2.	0.666
ACTB	ROCK1	ENSCHIP00000011080	ENSCHIP00000015667	Uncharacterized protein.	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.	0.726
ACTB	RPL13A	ENSCHIP00000011080	ENSCHIP00000024652	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	0.742
ACTB	SNAI2	ENSCHIP00000011080	ENSCHIP00000029179	Uncharacterized protein.	Snail family transcriptional repressor 2.	0.721
AR	ACTB	ENSCHIP00000024342	ENSCHIP00000011080	Androgen receptor.	Uncharacterized protein.	0.792
AR	HOXB13	ENSCHIP00000024342	ENSCHIP00000032940	Androgen receptor.	Homeobox B13.	0.662
AR	SNAI2	ENSCHIP00000024342	ENSCHIP00000029179	Androgen receptor.	Snail family transcriptional repressor 2.	0.437
AXIN2	ACTB	ENSCHIP00000022676	ENSCHIP00000011080	Axin 2.	Uncharacterized protein.	0.666
HOXB13	AR	ENSCHIP00000032940	ENSCHIP00000024342	Homeobox B13.	Androgen receptor.	0.662
HOXB13	MEIS1	ENSCHIP00000032940	ENSCHIP00000033811	Homeobox B13.	Meis homeobox 1.	0.699
HOXB13	MEIS2	ENSCHIP00000032940	ENSCHIP00000011965	Homeobox B13.	Meis homeobox 2.	0.638
MEIS1	HOXB13	ENSCHIP00000033811	ENSCHIP00000032940	Meis homeobox 1.	Homeobox B13.	0.699
MEIS2	HOXB13	ENSCHIP00000011965	ENSCHIP00000032940	Meis homeobox 2.	Homeobox B13.	0.638
ROCK1	ACTB	ENSCHIP00000015667	ENSCHIP00000011080	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.	Uncharacterized protein.	0.726
RPL13A	ACTB	ENSCHIP00000024652	ENSCHIP00000011080	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	Uncharacterized protein.	0.742
SNAI2	ACTB	ENSCHIP00000029179	ENSCHIP00000011080	Snail family transcriptional repressor 2.	Uncharacterized protein.	0.721
SNAI2	AR	ENSCHIP00000029179	ENSCHIP00000024342	Snail family transcriptional repressor 2.	Androgen receptor.	0.437