44 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MEF2A	MADS-box domain-containing protein. (500 aa)
	CTNNB1	Catenin beta 1. (781 aa)
	CYP1A1	Cytochrome P450 family 1 subfamily A member 1; Belongs to the cytochrome P450 family. (520 aa)
	LOC102180307	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	LOC108633554	Histone domain-containing protein. (136 aa)
	PPM1G	Protein phosphatase, Mg2+/Mn2+ dependent 1G. (543 aa)
	LOC102182848	Histone H3; Belongs to the histone H3 family. (136 aa)
	LOC108636012	Histone H3; Belongs to the histone H3 family. (136 aa)
	TBP	Uncharacterized protein. (327 aa)
	H3-4	Histone H3; Belongs to the histone H3 family. (136 aa)
	LOC108634231	Histone H3; Belongs to the histone H3 family. (136 aa)
	ARNTL	Aryl hydrocarbon receptor nuclear translocator like. (632 aa)
	LOC102172954	Histone H4. (103 aa)
	LOC102180554	Histone H3; Belongs to the histone H3 family. (136 aa)
	MYBL2	MYB proto-oncogene like 2. (686 aa)
	LOC106503499	Histone H3; Belongs to the histone H3 family. (136 aa)
	LOC106503502	Histone H4. (103 aa)
	LOC108633916	Histone H3; Belongs to the histone H3 family. (136 aa)
	LOC108636047	Histone H4. (103 aa)
	LOC106503503	Histone H4. (103 aa)
	NCOA2	Nuclear receptor coactivator. (1473 aa)
	LOC102171353	Histone H3; Belongs to the histone H3 family. (136 aa)
	LOC102169981	Histone domain-containing protein. (136 aa)
	GTF2F1	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (546 aa)
	TRIM33	Tripartite motif containing 33. (1127 aa)
	ENSCHIP00000009386	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (102 aa)
	ARNT	Aryl hydrocarbon receptor nuclear translocator. (768 aa)
	KMT2D	Lysine methyltransferase 2D. (5491 aa)
	NCOA1	Nuclear receptor coactivator. (1441 aa)
	CLOCK	Clock circadian regulator. (845 aa)
	NCOA3	Nuclear receptor coactivator. (1471 aa)
	KAT8	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (458 aa)
	AHR	Uncharacterized protein. (842 aa)
	PSME3IP1	Family with sequence similarity 192 member A. (251 aa)
	TTC33	Tetratricopeptide repeat domain 33. (262 aa)
	KAT2A	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (837 aa)
	LOC102189503	Histone H3; Belongs to the histone H3 family. (136 aa)
	ARNT2	Aryl hydrocarbon receptor nuclear translocator 2. (717 aa)
	THRAP3	Thyroid hormone receptor associated protein 3. (979 aa)
	KAT2B	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (810 aa)
	TP53	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (382 aa)
	LOC102191748	Histone domain-containing protein. (136 aa)
	KAT6A	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1993 aa)
	LOC102185882	Histone H3; Belongs to the histone H3 family. (136 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHR	ARNT	ENSCHIP00000020967	ENSCHIP00000009723	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator.	0.999
AHR	ARNT2	ENSCHIP00000020967	ENSCHIP00000026202	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator 2.	0.972
AHR	ARNTL	ENSCHIP00000020967	ENSCHIP00000004610	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator like.	0.668
AHR	CLOCK	ENSCHIP00000020967	ENSCHIP00000016977	Uncharacterized protein.	Clock circadian regulator.	0.668
AHR	NCOA1	ENSCHIP00000020967	ENSCHIP00000016401	Uncharacterized protein.	Nuclear receptor coactivator.	0.668
AHR	NCOA2	ENSCHIP00000020967	ENSCHIP00000007417	Uncharacterized protein.	Nuclear receptor coactivator.	0.668
AHR	NCOA3	ENSCHIP00000020967	ENSCHIP00000018463	Uncharacterized protein.	Nuclear receptor coactivator.	0.668
ARNT	AHR	ENSCHIP00000009723	ENSCHIP00000020967	Aryl hydrocarbon receptor nuclear translocator.	Uncharacterized protein.	0.999
ARNT	ARNT2	ENSCHIP00000009723	ENSCHIP00000026202	Aryl hydrocarbon receptor nuclear translocator.	Aryl hydrocarbon receptor nuclear translocator 2.	0.903
ARNT	CLOCK	ENSCHIP00000009723	ENSCHIP00000016977	Aryl hydrocarbon receptor nuclear translocator.	Clock circadian regulator.	0.559
ARNT	CYP1A1	ENSCHIP00000009723	ENSCHIP00000031186	Aryl hydrocarbon receptor nuclear translocator.	Cytochrome P450 family 1 subfamily A member 1; Belongs to the cytochrome P450 family.	0.902
ARNT2	AHR	ENSCHIP00000026202	ENSCHIP00000020967	Aryl hydrocarbon receptor nuclear translocator 2.	Uncharacterized protein.	0.972
ARNT2	ARNT	ENSCHIP00000026202	ENSCHIP00000009723	Aryl hydrocarbon receptor nuclear translocator 2.	Aryl hydrocarbon receptor nuclear translocator.	0.903
ARNTL	AHR	ENSCHIP00000004610	ENSCHIP00000020967	Aryl hydrocarbon receptor nuclear translocator like.	Uncharacterized protein.	0.668
ARNTL	CLOCK	ENSCHIP00000004610	ENSCHIP00000016977	Aryl hydrocarbon receptor nuclear translocator like.	Clock circadian regulator.	0.981
CLOCK	AHR	ENSCHIP00000016977	ENSCHIP00000020967	Clock circadian regulator.	Uncharacterized protein.	0.668
CLOCK	ARNT	ENSCHIP00000016977	ENSCHIP00000009723	Clock circadian regulator.	Aryl hydrocarbon receptor nuclear translocator.	0.559
CLOCK	ARNTL	ENSCHIP00000016977	ENSCHIP00000004610	Clock circadian regulator.	Aryl hydrocarbon receptor nuclear translocator like.	0.981
CTNNB1	H3-4	ENSCHIP00000031016	ENSCHIP00000004038	Catenin beta 1.	Histone H3; Belongs to the histone H3 family.	0.818
CTNNB1	KAT8	ENSCHIP00000031016	ENSCHIP00000019415	Catenin beta 1.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.412