STRINGSTRING
ACTB ACTB HOXC4 HOXC4 ALDH1A2 ALDH1A2 HOXB4 HOXB4 NKX2-2 NKX2-2 SOX11 SOX11 NKX6-1 NKX6-1 SHH SHH PAX7 PAX7 DBX1 DBX1 HOXB9 HOXB9 LHX1 LHX1 POU5F1 POU5F1 SOX1 SOX1 PHOX2B PHOX2B NOTUM NOTUM SCAI SCAI HOXB8 HOXB8 CDX4 CDX4 FOXA2 FOXA2 CTCF CTCF HOXC6 HOXC6 MAFB MAFB OLIG2 OLIG2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACTBUncharacterized protein. (375 aa)
HOXC4Homeobox C4. (264 aa)
ALDH1A2Aldehyde dehydrogenase 1 family member A2; Belongs to the aldehyde dehydrogenase family. (518 aa)
HOXB4Homeobox B4. (251 aa)
NKX2-2NK2 homeobox 2. (273 aa)
SOX11Transcription factor SOX. (444 aa)
NKX6-1NK6 homeobox 1. (367 aa)
SHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (443 aa)
PAX7Paired box 7. (503 aa)
DBX1Developing brain homeobox 1. (345 aa)
HOXB9Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (250 aa)
LHX1LIM homeobox 1. (406 aa)
POU5F1POU domain protein. (360 aa)
SOX1SRY-box transcription factor 1. (313 aa)
PHOX2BPaired like homeobox 2B. (315 aa)
NOTUMNotum, palmitoleoyl-protein carboxylesterase. (499 aa)
SCAIProtein SCAI; Tumor suppressor which functions to suppress MRTFA-induced SRF transcriptional activity. (611 aa)
HOXB8Homeobox B8. (243 aa)
CDX4Caudal type homeobox 4. (283 aa)
FOXA2Forkhead box A2. (467 aa)
CTCFCCCTC-binding factor. (727 aa)
HOXC6Homeobox C6. (235 aa)
MAFBMAF bZIP transcription factor B. (329 aa)
OLIG2Oligodendrocyte transcription factor 2. (329 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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