STRINGSTRING
LOC102176799 LOC102176799 VAMP7 VAMP7 LOC108636029 LOC108636029 RAB27A RAB27A GAPDHS GAPDHS ATG3 ATG3 LOC102181016 LOC102181016 VAMP3 VAMP3 ACTB ACTB TSG101 TSG101 SNAP23 SNAP23 PKM PKM RAB27B RAB27B PXDN PXDN VAMP8 VAMP8 ISG15 ISG15 ATG7 ATG7 CD63 CD63 GAPDH GAPDH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102176799Glyceraldehyde-3-phosphate dehydrogenase. (333 aa)
VAMP7Vesicle associated membrane protein 7; Belongs to the synaptobrevin family. (220 aa)
LOC108636029Synaptosomal-associated protein; Belongs to the SNAP-25 family. (211 aa)
RAB27ARAB27A, member RAS oncogene family. (221 aa)
GAPDHSGlyceraldehyde-3-phosphate dehydrogenase. (385 aa)
ATG3Uncharacterized protein. (158 aa)
LOC102181016Gp_dh_N domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (318 aa)
VAMP3Vesicle associated membrane protein 3. (104 aa)
ACTBUncharacterized protein. (375 aa)
TSG101Uncharacterized protein. (391 aa)
SNAP23Synaptosomal-associated protein; Belongs to the SNAP-25 family. (208 aa)
PKMPyruvate kinase; Belongs to the pyruvate kinase family. (531 aa)
RAB27BRAB27B, member RAS oncogene family. (218 aa)
PXDNPeroxidasin. (1525 aa)
VAMP8Vesicle associated membrane protein 8. (101 aa)
ISG15Interferon-stimulated protein 17/ubiquitin cross-reactive protein. (157 aa)
ATG7Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] (722 aa)
CD63Tetraspanin. (237 aa)
GAPDHGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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